Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00688 ATGGGGTGTTGTGTATCAACAAGCAGTCGAAGTACTTGTAGTAGTAGGAGCAATGGCGACACAATCTCTCCATCTTGTTTGGAAGTAGGTTTCTGTGGGCAAAAGAGAACGAGAAGAACATTCTCTGATCATGTCATTGCTCTGCAGAATCTTCCATCCCTACCTAATCGAATCTTCAGCAATGGAAAGAGCCGAAGTTCTTGCATATTCACACAGCAAGGCAAAAAGGGTATCAATCAGGATGCCATGATTGTATGGGAAGACTTTATCTCGGAAGATGCGATTTTCTGCGGTGTCTTTGATGGCCATGGTCCATTTGGTCATGTTGTTGCACGCAATGTCAGGGATACTCTGCCAGTAAAACTACTTTCTTTTTTGCACTCTTGTGAATCAAAGAGAAATGGGTCAGGCTCAGGCAAAGCTTGTTTCAAGGGGAATCCTGAAGATGGAGTCTGCGAGAAGGATTCTTCTACTGAGGATGTAGTGGATTCTGTCTGGAGAGAAGCTTTCATGAAGGCTTACAAGGCAATGGACAAAGAACTTAGGTCACATCCGAATTTGGACTGCTTCTGTAGTGGGAGCACAGCCGTCACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGCAACATTGGGGATTCACGAGCAATCATGGGATCCAAAGACGACAATGATTCCATGGTGGCCATTCAGTTAACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAACGAATCAAGCGGTGCAAAGGCAGAGTATTTGCATTGCAGGATGAGCCTGAGGTTCCCAGGGTGTGGTTGCCTTTTGATGATGCACCCGGATTAGCAATGGCTCGAGCATTTGGAGATTTCTGCTTAAAGGAGTATGGTGTGATTTCCATACCTGAGTTTTCTCATAGACTGCTTACAGATAGTGATCAGTTCATCGTTCTTGCCTCCGATGGGGTGTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTAGCCTCGGCACCAACTCGTTCACGGGCTGCAAGGATTCTGGTGGATTCTGCGGCTCGTGAGTGGAAACTTAAGTATCCGACGTCGAAGATGGATGACTGTGCTGTTGTGTGCCTGTTTTTGGATGGGAAGATGGACTCAGAATCTGATTATGACGAGCTGGGCTTTTCTTCAGCAACCATCCAGAGCAACCATTCTGGCAATCCAGCTGAATCAGATGACGGCCAGAAGTCTGAGCCATCTCTGCACCGGAACTTCACCGTGAGATCTGCTGATGAAAATGAGACTTATGGAAGACTGCCACCAGCTGACGTCTTCGAAGATGGAACAACATCAGATCAAAGCTGGTCAGGTTTGGAAGGTGTGACCCGTGTAAATTCACTGGTTCAGCTTCCTCGATTTTCCGAGGAAAGGCCAAACACTTGA 1413 0.4657 MGCCVSTSSRSTCSSRSNGDTISPSCLEVGFCGQKRTRRTFSDHVIALQNLPSLPNRIFSNGKSRSSCIFTQQGKKGINQDAMIVWEDFISEDAIFCGVFDGHGPFGHVVARNVRDTLPVKLLSFLHSCESKRNGSGSGKACFKGNPEDGVCEKDSSTEDVVDSVWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDDNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDSDQFIVLASDGVWDVLSNEEVVEIVASAPTRSRAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDELGFSSATIQSNHSGNPAESDDGQKSEPSLHRNFTVRSADENETYGRLPPADVFEDGTTSDQSWSGLEGVTRVNSLVQLPRFSEERPNT 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00688 470 CDD PP2Cc 65 370 IPR001932 -
Accr13g00688 470 SUPERFAMILY PP2C-like 56 372 IPR036457 -
Accr13g00688 470 Gene3D - 58 378 IPR036457 -
Accr13g00688 470 SMART PP2C_4 55 368 IPR001932 -
Accr13g00688 470 MobiDBLite consensus disorder prediction 1 20 - -
Accr13g00688 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Accr13g00688 470 MobiDBLite consensus disorder prediction 388 447 - -
Accr13g00688 470 MobiDBLite consensus disorder prediction 405 419 - -
Accr13g00688 470 PANTHER PROTEIN PHOSPHATASE 64 368 IPR015655 GO:0004722|GO:0006470
Accr13g00688 470 Pfam Protein phosphatase 2C 152 348 IPR001932 -
Accr13g00688 470 MobiDBLite consensus disorder prediction 388 404 - -
Accr13g00688 470 FunFam probable protein phosphatase 2C 52 57 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00688 Accr-Chr13 7609748 7612055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00688 1 470 PP2C-type Phosphatase Gene Family AT1G03590 68.058 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00688 - - gmx:100798340 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00688 13 7609748 7612055 Accr13g00688 13 7609748 7612055 ECH