Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00676 ATGGGTGGGATGAGATCTGCTTTTGAGTATAAAGGAGAGAAGATATATGGACAAGTTTTATTGGGATTCATGTTGATCTGTACGATTCAGTTTTCACAAGCGGACACGAATCCAACTGACGTTTCTGCAATAAATAACTTATATGCTGCGCTGGGCTCCCCTGTTCTCCCTGGGTGGGTTCCAAGTGGGGGAGATCCGTGTGGACAAGCATGGCAGGGCATTCAGTGTAATGGTTCAGATATACAAACAATAGTTCTGGTTGGTGCAAATTTGGGAGGCGAACTGGGTAATAGCTTGGGAACGTTTACTTCTCTAAGGAAAATAGATCTAAGCAACAACCACATTGGAGGAAGTATTCCAGCCAGCTTGCCAGTCTCCTTGCAAAATTTTTTTCTTTCAGGTAACCAGTTCACTGGAAGTATTCCAACATCTTTATCTACATTGACTGAACTGACAGTCATATCTTTTAATGAGAATCAATTATCAGGAGAAATCCCGGATGTATTTCAATCACTTACAAAATTGGTTAATCTAGATTTATCAAATAACAATTTTAGTGGGGAACTGCCTCCATCTGCAGAGAATTTGTCATCTGTGGCCTCCATACATCTGCAGAACAATCAACTATCTGGGACCCTTGATGTTTTACAAGACCTTCCACTGAAAGATTTGAATGTGGAGAACAACCAATTCAATGGACCAATTCCTCAAAAGCTTCTAAGCATCCCAAACTTCAGAAAAGATGGAAACCCATTTAATGTTAATGGCACTACGGCTTCAGCCCCTCCATCACATTCTCCAGCAACACCACCACCAGGAACTGTGGTTGCTGGGGCCCCTACTACTGGACATGTACCTACTACTGGACATGTACCTAGTACTACTAAACCGGCTGAAGGACCAACTACATCAAAGGAATCAAACTCTGGAAAAGCAAAAAAGGACACCAAACGGGTGGTTTGGATATCTATTGCAAGCGTATTAGGATTTATTATCTTATTGTTGGCACTAATTCTCTTTACTCCAAGATGTAGAAGAAGGGAAAGAGTTGGCAGAATTTCTAAGCAACACCAAATTGGAGCATATGGAGACGACAGACACAATCATAGGAATCATGGGACTTCAGTCCAACCACCAAGTCAAACTGTAGAAGTACCAAAGGGGGTTGTTAGAACAAAAGAAGATCGTCAAGTAGAGACCAGGAGAGTAGAAGCTATTCCCAGGTCACAAGATGAGCAAGAGAAAGATGTGCGGAGGATTGGAAGCTTACTCAAGCCGGATGACCATGCGATAGATATGAGCGCACTGGATGTGTACTCATTGCCACCCCCTCCCCCTCCCCCTCCCCCTCCACCCCCACCCCCACCCCCACCCCCACCACCACCTAATGAGGAGGTGACTGCTGAGCCAATTCCTTTCCCTCGAGGAGCTACAGTCAATCCTTCTGTTAAAAAGCCAGTTTCTCCCACTTTTGCAAAATCTTTCACTATTGCATCCCTTCAACAGTATACGAACAGCTTTTCTCAAGATAACCTTATAGGAGGAGGCATGCTGGGGAGAGTATATAGGGCAGAGCTTCCTGATGGGAAGCTACTTGCCGTGAAGAAACTGGAAAAAAGAGTTTCTGAACATCAAAAGGATCATGAATTTCTTGAATTGGTAAACAGTATTGACCGAATCAGGCATGCAAATATTGTTGAGCTTATTGGTTTCTGTGCTGAGCATGGCCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCACTGCAGGATGCACTGCATTCAGATGACGAGTTCAAAACAAGATTGTCATGGAATGCTCGCATTCGGATTGCGCTTGGGGCGGCCAGAGCCTTAGAGTATTTGCATGAGATCTGCCAACCACCTGTTGTACACAGAAATTTCAAGGCTGCCAATATTCTCCTTGATGATGATCTGTCAGTGCGTGTTTCTGATTGTGGTTTGGCTCCCTTGATAGCTTCAGGTTCTGTAAGTCAGCTCTCAGGGCAACTGCTTACAGCTTATGGCTATGGAGCTCCAGAATTTGAATCTGGAATTTACACTCACCAGAGTGATGTGTACAGTTTTGGAGTGGTTATGTTAGAACTATTGACAGGCCGCCAGTCCCATGACAGTACACGTTCTCGAGGCGAGCAATTTCTAGTTAGATGGGCAATTCCCCAACTACATGACATTGATGCCTTGTCAAATATGGTAGATCCTTCTCTGAATGGAGACTACCCAGCCAAATCATTGTCAAACTTTGCAGACATTATTTCTCGGTGTGTTCAGCCGGAGCGGGAATTTAGGCCACCTATGTCAGAGGTTGTTCAATATCTGCTAGACATGGTAAGGAAGGGATCTCACAGAAGTGGATCAACTGAAGACTGA 2394 0.4424 MGGMRSAFEYKGEKIYGQVLLGFMLICTIQFSQADTNPTDVSAINNLYAALGSPVLPGWVPSGGDPCGQAWQGIQCNGSDIQTIVLVGANLGGELGNSLGTFTSLRKIDLSNNHIGGSIPASLPVSLQNFFLSGNQFTGSIPTSLSTLTELTVISFNENQLSGEIPDVFQSLTKLVNLDLSNNNFSGELPPSAENLSSVASIHLQNNQLSGTLDVLQDLPLKDLNVENNQFNGPIPQKLLSIPNFRKDGNPFNVNGTTASAPPSHSPATPPPGTVVAGAPTTGHVPTTGHVPSTTKPAEGPTTSKESNSGKAKKDTKRVVWISIASVLGFIILLLALILFTPRCRRRERVGRISKQHQIGAYGDDRHNHRNHGTSVQPPSQTVEVPKGVVRTKEDRQVETRRVEAIPRSQDEQEKDVRRIGSLLKPDDHAIDMSALDVYSLPPPPPPPPPPPPPPPPPPPPPNEEVTAEPIPFPRGATVNPSVKKPVSPTFAKSFTIASLQQYTNSFSQDNLIGGGMLGRVYRAELPDGKLLAVKKLEKRVSEHQKDHEFLELVNSIDRIRHANIVELIGFCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEICQPPVVHRNFKAANILLDDDLSVRVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGIYTHQSDVYSFGVVMLELLTGRQSHDSTRSRGEQFLVRWAIPQLHDIDALSNMVDPSLNGDYPAKSLSNFADIISRCVQPEREFRPPMSEVVQYLLDMVRKGSHRSGSTED 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00676 797 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Accr13g00676 797 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 166 IPR046959 -
Accr13g00676 797 SUPERFAMILY L domain-like 37 244 - -
Accr13g00676 797 SUPERFAMILY Formin homology 2 domain (FH2 domain) 451 461 - -
Accr13g00676 797 Gene3D Ribonuclease Inhibitor 43 146 IPR032675 -
Accr13g00676 797 Pfam Protein tyrosine and serine/threonine kinase 510 781 IPR001245 GO:0004672|GO:0006468
Accr13g00676 797 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 475 584 - -
Accr13g00676 797 Coils Coil 534 554 - -
Accr13g00676 797 MobiDBLite consensus disorder prediction 388 416 - -
Accr13g00676 797 SUPERFAMILY Protein kinase-like (PK-like) 483 781 IPR011009 -
Accr13g00676 797 Gene3D Phosphorylase Kinase; domain 1 478 584 - -
Accr13g00676 797 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 585 795 - -
Accr13g00676 797 MobiDBLite consensus disorder prediction 250 315 - -
Accr13g00676 797 MobiDBLite consensus disorder prediction 286 307 - -
Accr13g00676 797 MobiDBLite consensus disorder prediction 437 484 - -
Accr13g00676 797 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Accr13g00676 797 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Accr13g00676 797 Gene3D Ribonuclease Inhibitor 147 258 IPR032675 -
Accr13g00676 797 ProSiteProfiles Protein kinase domain profile. 507 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00676 797 MobiDBLite consensus disorder prediction 362 416 - -
Accr13g00676 797 MobiDBLite consensus disorder prediction 439 468 - -
Accr13g00676 797 Gene3D Transferase(Phosphotransferase) domain 1 585 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00676 Accr-Chr13 7497448 7503368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00676 31 797 Strubbelig Receptor Gene Family AT4G03390 61.499 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Accr13g00676 PK_Tyr_Ser-Thr 4.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00676 - - gmx:100811490 1098.19