Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00648 ATGGAACAAGCACGCCCTTATTATAAGCCTCTCGATCAATCTAGGGTTGGTCCTGCCTTACCTCCACTTACAACATCTCTTCCACTCACATTCCTAGACATTTCTCTTGCTGGTCCTATCTATGCCAGACGCCAATTTTTCTACCACTTCCCTTACCCTACCCACCATTTCATCACCACTACGCTTCCCTCTCTCAAACACTCTCTCTCTGTTGCTCTCCAATATTTCTTTCCTCTCGCCGGAAACCTCCTCTGTCCGCCGCCCCCTCACAAGCCTTTCATCAGCTGCACCGGCGACCACTCCGTCGCCTTAACCGTGGTCGAGTCCGCTTCTGATGATTTCAATCTTTATTCAGCTAACTCCCCCAAAAATCTCAAAGGCTTGGACAGCTTGATTCCCGAGCTATCATGGAGTACAGCGCACGAAGATGTCTATGACTCTGACCCCACATTCGTCTTCCCAATAGTAGCCCTACAAGTCACGGTTTTTCCAAACGCTGGCTTTTGTATCGCCATCACGTACTGCCACGTCATGGATGCTAGTAGTTGCATTCATTTCATGAAAACTTGGGCTTCCATTTGTAGATCTGACGGCGGAGATATGACTTTTCTGGAGAAATCCCGGCCGTCGTATGACAGGGAAGTGATCAAGGACCCAAGAGGCCTTGAAGCCGTTTTCTTGAGGGACTATTTCATGGAGAGGTCAACGTGGAAGGACAATCTCCTGGGTAAAACTTCCAAGATCATCCTCAGTGTTGACGATGACCTTTACAAGGCAACAATTGTTTTTGGTAGAGAAGACATCGAAATACTAAGAAAGTGGGTAATGAATCAGTGGGGGCAAAATGGAGAATCCAACGCACCGAAATATCTATCCAAATTTGTTGTGACATGTGGCTTTGTGTGGACCAGCTATGTTAAGACGAGACATAGAGATGAAAGTGAAGAAGAAGAGGAAGATGAGTACTTTCGTTTTGGAGCAGATTGCAGAAACCGACTAGAGTATCCGTTACAAAAGAACTACTTTGGGAACTGCATAACGAGATGCCATGCAGAGCTGAAGAGAAGAGAGCTGAAAGGAGAAGAAGGGTTTTTGAAGGCGGTGAAGGTGATTGATGAGGCAATACAAGATATGAAAAAAGAGCCTTTCAAAGATGCGGAGAGGTGGAAGGAAGACTTTGAGAAAACGTTTGTGTTGGGAAGTACGGTGCTGGTTACAGGGTCACCGAAATTCACGGTTTATGAGACTGATTTTGGGTTTGGGAGACCTAAAAAGGTTGAAATGGTACATGGCTTTAAGTGCATGTCACTTGCTGAGAGTGGATCTGAAGAAGGTGGGCTTGAGGTTGGCTTGGTATTTAAGAGGGATGACTATGAACATTTCATGTCTCTTGTTGAACTGGGACTCCAAACTTTTAAATCTTAG 1425 0.4561 MEQARPYYKPLDQSRVGPALPPLTTSLPLTFLDISLAGPIYARRQFFYHFPYPTHHFITTTLPSLKHSLSVALQYFFPLAGNLLCPPPPHKPFISCTGDHSVALTVVESASDDFNLYSANSPKNLKGLDSLIPELSWSTAHEDVYDSDPTFVFPIVALQVTVFPNAGFCIAITYCHVMDASSCIHFMKTWASICRSDGGDMTFLEKSRPSYDREVIKDPRGLEAVFLRDYFMERSTWKDNLLGKTSKIILSVDDDLYKATIVFGREDIEILRKWVMNQWGQNGESNAPKYLSKFVVTCGFVWTSYVKTRHRDESEEEEEDEYFRFGADCRNRLEYPLQKNYFGNCITRCHAELKRRELKGEEGFLKAVKVIDEAIQDMKKEPFKDAERWKEDFEKTFVLGSTVLVTGSPKFTVYETDFGFGRPKKVEMVHGFKCMSLAESGSEEGGLEVGLVFKRDDYEHFMSLVELGLQTFKS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00648 474 PANTHER - 11 471 - -
Accr13g00648 474 Pfam Transferase family 14 462 - -
Accr13g00648 474 Gene3D - 253 471 IPR023213 -
Accr13g00648 474 Gene3D - 11 240 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00648 Accr-Chr13 7280131 7281555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00648 12 461 Monolignol Biosynthesis Gene Families AT5G48930 23.779 7.93e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00648 - - gmx:100813271 606.29