Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00647 ATGGGTAGAGCACCTTGCTGCGACAAAAATGGCCTCAAGAAAGGTCCCTGGACCCCTGAAGAAGACTCCAAGCTCATCAACTACATTCAGATTCATGGCCCTGGCAATTGGCGCACCCTCCCCAAAAATGCTGGTCTTGAAAGATGTGGCAAGAGTTGCCGACTTCGATGGACTAATTACCTCCGGCCTGACATCAAGAGAGGAAGGTTCTCCTTCGAAGAAGAAGAAATCATTATCCAGCTCCACAGCATAATGGGAAACAAGTGGTCGGCGATAGCAGCTAGATTGCCTGGAAGAACCGACAATGAAATTAAGAACTACTGGAACACCCACATACGAAAGAGGCTTCTTCGAATGGGAATCGACCCTGTTACTCATGCGCCACGACTCGATCTTCTCGACATATCCTCTGTACTTGGGTCTTTGTTAGGGAACACGTCGCTCTTAAATCTGCAGGGCTTGTTGGGGGCTCAGGCCCTGATGAACCCTGAATTGTTAAAAATGGCCACCACTCTGTTATCGTTGGAGAACGAAAACCCAGAACTAGTTTCACAGAATCTACAACATATGATCCAGGCTGGAAATTCTCAAGTTCAAGCACAAACCCCAATTGATTCCTCACTACCACAGTTCAGTAGCCAGTTTCAGATGCCAATGTCAACCAACAACTTAGAAAGATTCTCAGGGGATTTGACCAATATGGGATTTTCAGATTCCCAAGTTCCGTCCTGTATAGCTGGGAACATTGATCTGTTGCAGCAAAACCAATCTGAATTTCTGGGAGATCCAACTTTCTTGAAAAACTTGGGTTATGACTCTGTTTTTTCGACGCCGTCATCGAGTACAACCCCATTGAACTCATCATCGACGCATTTGAATAATAGCAGTAGGGAAGAAGAGAGAGATAGCTATTGCAGCGACTTGTTCAATTTCGAAATTCCAGAGAATTTAGATCTTAGTAACTTGCTGTAA 972 0.4506 MGRAPCCDKNGLKKGPWTPEEDSKLINYIQIHGPGNWRTLPKNAGLERCGKSCRLRWTNYLRPDIKRGRFSFEEEEIIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDISSVLGSLLGNTSLLNLQGLLGAQALMNPELLKMATTLLSLENENPELVSQNLQHMIQAGNSQVQAQTPIDSSLPQFSSQFQMPMSTNNLERFSGDLTNMGFSDSQVPSCIAGNIDLLQQNQSEFLGDPTFLKNLGYDSVFSTPSSSTTPLNSSSTHLNNSSREEERDSYCSDLFNFEIPENLDLSNLL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00647 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr13g00647 323 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr13g00647 323 CDD SANT 69 112 IPR001005 -
Accr13g00647 323 Gene3D - 11 67 - -
Accr13g00647 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr13g00647 323 Gene3D - 69 116 - -
Accr13g00647 323 FunFam Transcription factor MYB39 69 130 - -
Accr13g00647 323 CDD SANT 16 61 IPR001005 -
Accr13g00647 323 FunFam MYB-related transcription factor 13 66 - -
Accr13g00647 323 MobiDBLite consensus disorder prediction 277 293 - -
Accr13g00647 323 SMART sant 66 114 IPR001005 -
Accr13g00647 323 SMART sant 13 63 IPR001005 -
Accr13g00647 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 276 - -
Accr13g00647 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr13g00647 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr13g00647 323 MobiDBLite consensus disorder prediction 277 299 - -
Accr13g00647 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr13g00647 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00647 Accr-Chr13 7259816 7260999 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00647 1 323 MYB Transcription Factor Family AT4G21440 51.676 1.31e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr13g00647 Myb_DNA-binding 8.1e-15 CL0123