Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00644 ATGGATTTTGACCTCGAAAGCCCTCTGCAAAACTTTCACGACCATCCTCCCTCTTCTCTCTTTCTCATCGAAGCTCATCACACCCCATCCCAAACCTACTTCCACTCTCTCAAGTCCCGAGATTTCGACTTCACCGTCAGAAGAGAGCTCATTTCTTTAATCTCCCAGTTGTCCTGCACATTTGATCCTCTCTTGTCGTACCTAGCTGTTAACTACGTGGATCGTTTCCTTGCCAATCGAGGCCTTTCGCAACCAAAGCCATGGATCCTCAGGCTTCTCGCAGTCTCTTGTCTCTCTCTAGCTGCCAAGATGATGAGAACAGAGTACTCTGTTTCCGATATACAGGGTGAGGAAGGTTTAATTTTTGAGGCCCGAACAGTACGAAGAATGGAGTCACTTGTCTTAGGAGTTCTACAATGGCGAATGCGTTCGATCACTCCCTTTTCTTTCATTTCCTTCTTCATTGCTCTGTTCAAACTCAAAGACTTTTCACAGAGGCAGGTTCTGAAAGATCGAGCCACTGAAATTATAATCAGAGCACAAAGAGATATAAGTTTCTTGGAATTTAAGCCTTCTGTAGTTGCTGCATCAGCCCTTCTCTCTGCCTCTCGTGAATTGCTAACTTCCCAGTATCCGTGCTTCTTAAGCGCAATATCCGATTGTTCATATGTAAATAATGAAAGTATATTGAAGTGCAATAATGTGATACAAGACGTAACAATGGAGGGGTACGAGCCTGCATTCGATTGGGTTTCAAGTTCTGAGACACCTATTAATGTGTTAGACCACAATTTTCTGAGCTCAGAAAGCGAAAAAACCAATTCAACCACTATTACTGCCTCTACCCTGAGACAAGAGAGGGACCTTAAGAGAAGGAAAATAGCTGGTTACGGTAATAGTCATGCGCTCCAGAGCTCTCAAATCGAACAATGCTTATCTGAAACAGAGGACTTTTAA 957 0.4347 MDFDLESPLQNFHDHPPSSLFLIEAHHTPSQTYFHSLKSRDFDFTVRRELISLISQLSCTFDPLLSYLAVNYVDRFLANRGLSQPKPWILRLLAVSCLSLAAKMMRTEYSVSDIQGEEGLIFEARTVRRMESLVLGVLQWRMRSITPFSFISFFIALFKLKDFSQRQVLKDRATEIIIRAQRDISFLEFKPSVVAASALLSASRELLTSQYPCFLSAISDCSYVNNESILKCNNVIQDVTMEGYEPAFDWVSSSETPINVLDHNFLSSESEKTNSTTITASTLRQERDLKRRKIAGYGNSHALQSSQIEQCLSETEDF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00644 318 FunFam D6-type cyclin 141 234 - -
Accr13g00644 318 SMART Cyclin_C_2 145 281 IPR004367 -
Accr13g00644 318 SUPERFAMILY Cyclin-like 126 241 IPR036915 -
Accr13g00644 318 Gene3D - 30 143 - -
Accr13g00644 318 SMART cyclin_7 48 136 IPR013763 -
Accr13g00644 318 Pfam Cyclin, N-terminal domain 24 142 IPR006671 -
Accr13g00644 318 Gene3D - 20 233 - -
Accr13g00644 318 PANTHER CYCLINS 29 237 IPR039361 -
Accr13g00644 318 SUPERFAMILY Cyclin-like 18 142 IPR036915 -
Accr13g00644 318 Pfam Cyclin, C-terminal domain 145 240 IPR004367 -
Accr13g00644 318 FunFam D6-type cyclin 30 140 - -
Accr13g00644 318 CDD CYCLIN_AtCycD-like_rpt2 145 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00644 Accr-Chr13 7206365 7207765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00644 1 293 Core Cell Cycle Gene Families AT4G03270 47.097 1.75e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00644 K18812 - qsu:111984715 381.719