Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00641 ATGATGAGAAGCCCATACTATGACCAGAATGGATTAAAGAGGGGTGCGTGGAGTAAGCAAGAGGATCAAATGTTAAGAACATATGTTGAGAGATACGGCCACAGTAATTGGCGTCAACTTCCCAAACACGCAGGTTTATCAAGGTGTGGAAAGAGTTGCAGACTCCGATGGCTAAATTACCTTCGCCCGGGCGTTAAGCGGGGAAATTACACCCAAGAAGAAGACCAACTCATCATCAATTTACATCAACAGCTTGGAAATAAATGGTCTTCCATTGCCAAAAGATTGCCAGGGAGAAGTGACAACGAAATTAAGAACCATTGGCATAGCCACCTAAAGAAGCTCTTGGAGCGTAACCATGCGGAAAAATCTGAGTTGAAAACGAAGGCTAGTGATAATCACGAAGGAGAAGCAACAAAGTACTTGGAACCTGAAAACACTCTGCTTGGTTTTGCTGCGGCTTCCTCCAGTGATATTATCTCATCACAAAATTCACCACACATCTACAATACATCTTCAAACTTTTCCTTCGGAGGAGGAAGTGTTGTTAATGCTGCTGCATGCGAAATATTTGAAGAATTCGGCGATTTTTGGACGCAACCATTTCTCCCAGAAAATATATATGACCAAAATAACTATAATAGTCTGAACTATGCAGCAAATGGAGTAGACGTGGATGAATATTCCTCATACATCTTCGATAATGCTGATTTTTTGTGCCACGTGATGCAGGAATTCCCAGAAGATCCTAAAATGGATATATAA 765 0.4131 MMRSPYYDQNGLKRGAWSKQEDQMLRTYVERYGHSNWRQLPKHAGLSRCGKSCRLRWLNYLRPGVKRGNYTQEEDQLIINLHQQLGNKWSSIAKRLPGRSDNEIKNHWHSHLKKLLERNHAEKSELKTKASDNHEGEATKYLEPENTLLGFAAASSSDIISSQNSPHIYNTSSNFSFGGGSVVNAAACEIFEEFGDFWTQPFLPENIYDQNNYNSLNYAANGVDVDEYSSYIFDNADFLCHVMQEFPEDPKMDI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00641 254 CDD SANT 69 112 IPR001005 -
Accr13g00641 254 CDD SANT 16 61 IPR001005 -
Accr13g00641 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr13g00641 254 Gene3D - 14 66 - -
Accr13g00641 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr13g00641 254 Gene3D - 68 142 - -
Accr13g00641 254 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr13g00641 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 176 - -
Accr13g00641 254 FunFam MYB-related transcription factor 13 66 - -
Accr13g00641 254 SMART sant 13 63 IPR001005 -
Accr13g00641 254 SMART sant 66 114 IPR001005 -
Accr13g00641 254 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr13g00641 254 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr13g00641 254 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr13g00641 254 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00641 Accr-Chr13 7123605 7124784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00641 1 119 MYB Transcription Factor Family AT2G31180 66.387 1.26e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr13g00641 Myb_DNA-binding 8.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00641 K09422 - tcc:18608585 239.58