Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00640 ATGAGAGGCCCTTACTATGACAGAAATGGAATAAAGAGAGGTGCTTGGAGCAAGGAAGAGGATGAAAGGTTAAGAGCATATGTTGAGAGATACGGACACAGTAATTGGCGTCAACTTCCCAAACACGCAGGTTTATCAAGGTGCGGAAAGAGTTGCAGACTGCGATGGCTAAATTACCTAAGCCCAGATGTAAAGCACGGGAATTTCAGTCATAAAGAAGACGAAACCATCATCCAATTACATCAACAACATGGAAATAAGTGGTCTTTGATTGCGGAAAGCTTACCAGGGAGAAGTGACAACCAGATTAAGAACCATTGGCATAGCCACCTAAAGAAGCACTTGGAGTGCAATCACGGGGCAAAATCTGAGTTCAAAATGAAACCTGATGGTGCTTGTAAAGGAGAAACTACAAAGTATTTCGAACCTGAAAACCCTTTGCTCGGTTTTGATTCTGCTTCCTCCAGCAATATCTCAGAAAGCTCACCACCTAGTTACTGTCAATTATCAACCGTTGCCTTCGGAGAAGAAATATATGGAGAATTCGGAGATTTTTGGACGCAACCATTTGTCCCAGAGAACACGTACAACCAGGACTATGACTATTATAGTCTAAACTGTGCAGCGGATGGAGCTGAAGTGGACGAGTATTCCTCGTACCTCTTGGATAATGCTGAGTTTTTGTGA 687 0.4294 MRGPYYDRNGIKRGAWSKEEDERLRAYVERYGHSNWRQLPKHAGLSRCGKSCRLRWLNYLSPDVKHGNFSHKEDETIIQLHQQHGNKWSLIAESLPGRSDNQIKNHWHSHLKKHLECNHGAKSEFKMKPDGACKGETTKYFEPENPLLGFDSASSSNISESSPPSYCQLSTVAFGEEIYGEFGDFWTQPFVPENTYNQDYDYYSLNCAADGAEVDEYSSYLLDNAEFL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00640 228 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Accr13g00640 228 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 144 - -
Accr13g00640 228 CDD SANT 68 111 IPR001005 -
Accr13g00640 228 CDD SANT 15 60 IPR001005 -
Accr13g00640 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Accr13g00640 228 Gene3D - 13 65 - -
Accr13g00640 228 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Accr13g00640 228 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr13g00640 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Accr13g00640 228 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Accr13g00640 228 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Accr13g00640 228 SMART sant 65 113 IPR001005 -
Accr13g00640 228 SMART sant 12 62 IPR001005 -
Accr13g00640 228 FunFam Transcription factor RAX3 6 66 - -
Accr13g00640 228 Gene3D - 68 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00640 Accr-Chr13 7082961 7084318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00640 2 118 MYB Transcription Factor Family AT2G31180 63.248 9.63e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr13g00640 Myb_DNA-binding 5.1e-16 CL0123