Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00637 ATGATGAGAGGCCCTCACTATGACAAAAATGGAATAAAGAGAGGTGCTTGGAGCAAGGAAGAGGACGAAAGGTTAAGAGCATATGTTGAGAGATACGGACACAGTAATTGGCGTCAACTTCCCAAATACGCAGGTTTATCAAGGTGCGGAAAGAGTTGCAGACTGCGATGGCTAAATTACCTTAGCCCCGATGTAAAGCACGGGAATTTCACTCATAAAGAAGACGAAACCATCATCCAATTACATCAACAACATGGAAATAAGTGGTCCTTGATTGCGGAAAGATTACCAGGGAGAAGTGACAACGAGGTTAAGAACCATTGGCATAGCCACCTAAAGAAGCACTTGGAGTGCACTCACGGGGCAAAATCTGAGTTCACAATGAAACCTAGTGGTGCTTCTAAAGGAGAAACTACAAAGTATTTCGAACCTGAAAACCGTTTGCTCGGCTTTGATTCTGCTTCCTCCAGCAATATTTCAGAAAGCTCACCACCTAGGTACTGTTCATTATCAACCTTTGCCTTCAGAGAAGAAATATATGAAGAATTCGGAGACTTTTGGACGCAACCATTTGTCCCAGAGAACACGTGTAAGCAGGACTATGATTATTATAGTCTGAACTATGCAACGGATGGAGCTGACGTGGACGAATATTCCTCGTACCTCTTGGATAATGCTGAGTTTTTGTGCCAAGTCATGCAAGAATTTCCAGAAAATCCTACAAAGGATATAGTATGA 738 0.4255 MMRGPHYDKNGIKRGAWSKEEDERLRAYVERYGHSNWRQLPKYAGLSRCGKSCRLRWLNYLSPDVKHGNFTHKEDETIIQLHQQHGNKWSLIAERLPGRSDNEVKNHWHSHLKKHLECTHGAKSEFTMKPSGASKGETTKYFEPENRLLGFDSASSSNISESSPPRYCSLSTFAFREEIYEEFGDFWTQPFVPENTCKQDYDYYSLNYATDGADVDEYSSYLLDNAEFLCQVMQEFPENPTKDIV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00637 245 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr13g00637 245 FunFam Transcription factor RAX3 7 67 - -
Accr13g00637 245 CDD SANT 69 112 IPR001005 -
Accr13g00637 245 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr13g00637 245 CDD SANT 16 61 IPR001005 -
Accr13g00637 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr13g00637 245 Gene3D - 6 67 - -
Accr13g00637 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr13g00637 245 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr13g00637 245 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 149 - -
Accr13g00637 245 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr13g00637 245 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Accr13g00637 245 SMART sant 13 63 IPR001005 -
Accr13g00637 245 SMART sant 66 114 IPR001005 -
Accr13g00637 245 Gene3D - 69 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00637 Accr-Chr13 7009032 7010557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00637 1 116 MYB Transcription Factor Family AT2G31180 64.655 1.45e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr13g00637 Myb_DNA-binding 7.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00637 K09422 - cit:102630815 231.106