Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00635 ATGGTGAGAGGTCCTTCCTTCGACGCAAATGGAGTTAAGAAAGGTGCATGGAGCGAAGAAGAAGACCAGAAGCTCATTTCTTTTATTCAGACCCATGGCCATCCTAATTGGCGCCAACTTCCCAAGTTAGCAGGGTTGGCAAGATGTGGAAAGAGCTGCAGGCTTCGATGGATGAACTACCTGCGACCAAATGTAAAACGTGGCAGCTATACTGCACAAGAGGAGGAAATCATCCTCAAACTACACGAACAACATGGAAATAAGTGGTCGCTGATTGCCGAGAAGTTACCTGGAAGAACAGACAACCATATAAAGAATTATTGGCACAGCCAACTCAAGAGGCGGTCCAGGGACAGAGAAAAGAGTAGTTCTTCTGAGGTGAAAGGCAAGAAGTCAGGCCGTCAAAATAATATGACAAAGTATTCGTCAGAAGCTGATATTGTGAAAGTTGTGAATGAGTTGAGTAACATATTAGAAAGCTCATCACTGGACTTTATGGACACGACGTCGTCGACCCTGGCCGAGCAAGACAACTACACTCCTTCCTTGCCTTCCATTGATACAGAATCTACCACCACCAACAATTCGCCAGAAGAATATAATAGCGTGGCTTTGCGGGAAGTTTATAAATTTCAAGAATTTAGCGGCGATTTTTGGACTGAGCCGTTTGTATCAGAAGATATTTACAGTGATTATTGCAATACAAATAATGGAGCCGCCATAGACATATTTTCATATGATGGCGCACTTTTGTTTTTCTAA 762 0.4318 MVRGPSFDANGVKKGAWSEEEDQKLISFIQTHGHPNWRQLPKLAGLARCGKSCRLRWMNYLRPNVKRGSYTAQEEEIILKLHEQHGNKWSLIAEKLPGRTDNHIKNYWHSQLKRRSRDREKSSSSEVKGKKSGRQNNMTKYSSEADIVKVVNELSNILESSSLDFMDTTSSTLAEQDNYTPSLPSIDTESTTTNNSPEEYNSVALREVYKFQEFSGDFWTEPFVSEDIYSDYCNTNNGAAIDIFSYDGALLFF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00635 253 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr13g00635 253 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr13g00635 253 CDD SANT 16 61 IPR001005 -
Accr13g00635 253 MobiDBLite consensus disorder prediction 110 141 - -
Accr13g00635 253 SMART sant 13 63 IPR001005 -
Accr13g00635 253 SMART sant 66 114 IPR001005 -
Accr13g00635 253 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr13g00635 253 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr13g00635 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 199 - -
Accr13g00635 253 Gene3D - 69 143 - -
Accr13g00635 253 MobiDBLite consensus disorder prediction 110 128 - -
Accr13g00635 253 FunFam MYB-related transcription factor 13 66 - -
Accr13g00635 253 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr13g00635 253 Gene3D - 7 67 - -
Accr13g00635 253 CDD SANT 69 109 IPR001005 -
Accr13g00635 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr13g00635 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr13g00635 253 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00635 Accr-Chr13 6980809 6981930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00635 1 115 MYB Transcription Factor Family AT1G06180 65.217 1.88e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr13g00635 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00635 K09422 - gmx:100781032 231.491