Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00633 ATGAGGAACCCTCGCAGTGACACAAATGGATTGAAGAAACGCACATGGCCACCAGAAGAAGACCACAAGCTCATTGCTTATGTTACTAGGTATGGTTGCTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGTCTGGCAAGGTGCGGGAAGAGTTGCAGGCCGAGGTGGCTCAATTACCTGGGGCCCGACATTAAAAGAGGCAACTACACTAAGGAAGAAGATGAACTTATCATCAAAACTCCACCGCCAGCTTGGTAA 258 0.5 MRNPRSDTNGLKKRTWPPEEDHKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRPRWLNYLGPDIKRGNYTKEEDELIIKTPPPAW 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00633 85 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Accr13g00633 85 Pfam Myb-like DNA-binding domain 16 76 - -
Accr13g00633 85 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 79 - -
Accr13g00633 85 FunFam MYB-related transcription factor 12 65 - -
Accr13g00633 85 SUPERFAMILY Homeodomain-like 14 79 IPR009057 -
Accr13g00633 85 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Accr13g00633 85 Gene3D - 12 65 - -
Accr13g00633 85 CDD SANT 15 60 IPR001005 -
Accr13g00633 85 SMART sant 12 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00633 Accr-Chr13 6935668 6936038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00633 2 79 MYB Transcription Factor Family AT4G21440 58.974 1.05e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr13g00633 Myb_DNA-bind_6 4.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00633 K09422 - cpap:110816992 143.28