Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00631 ATGAGGAACCCTCGCAGTGACACAAATGTATTGAAGAAAGGCACATGGACACCAGAAGAAGACCGCAAGCTCATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGTCTGGCAAGGTGTGGGAAGAGTTGCAGGCTGAGGTGGCTCAATTACCTGAGGCCCGACATTAAAAGAGGCAACTACACCAAGGAAGAAGATGAACTTATCATCAAACTCCACTGCCAGCTTGGTAACAGATGGTCTGCCATAGCAGCTAAGTTACCGGGAAGAACAGACAATGAGATAAAGAACCACTGGCACACCAACCTCAAAAACAGGAGCAAAACTCAACCTCAAAACAACTCAGTCAGAGATGACAATGATGGAATTATCGTCAAGGAAGGCACGCAATATCATTCTCAAGGTATCACTACTGACTCCGCAACTTCCAACGACCATGGGAAATCGGGGGCTGAGTCATCAAGCTCGCCGAGTGAATCCTCGGAGAGTAACCAGGATTCGGTCAGAGATCATGAGTTCTCTTTTCTTGATGCGTATAATAATGATCAGCCAATGAGTGGAAATTTCTGGACGGATCCATGTGTGGTTGATTCTGATGACCTCCACTTCTACCCTAATACTGAATTAACGCCGATCGAGAATGAAGCTCAAGTCTCTGCTCCTTTCTACAATATTACGCAGCTTTGGACTCACAATTTCTACGACCAATATTGTGGTCTCTTCTACAATTCCAATCAATAG 765 0.4575 MRNPRSDTNVLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYLRPDIKRGNYTKEEDELIIKLHCQLGNRWSAIAAKLPGRTDNEIKNHWHTNLKNRSKTQPQNNSVRDDNDGIIVKEGTQYHSQGITTDSATSNDHGKSGAESSSSPSESSESNQDSVRDHEFSFLDAYNNDQPMSGNFWTDPCVVDSDDLHFYPNTELTPIENEAQVSAPFYNITQLWTHNFYDQYCGLFYNSNQ 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00631 254 Gene3D - 68 131 - -
Accr13g00631 254 MobiDBLite consensus disorder prediction 108 177 - -
Accr13g00631 254 CDD SANT 68 111 IPR001005 -
Accr13g00631 254 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Accr13g00631 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Accr13g00631 254 MobiDBLite consensus disorder prediction 112 127 - -
Accr13g00631 254 CDD SANT 15 60 IPR001005 -
Accr13g00631 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 180 - -
Accr13g00631 254 SMART sant 65 113 IPR001005 -
Accr13g00631 254 SMART sant 12 62 IPR001005 -
Accr13g00631 254 SUPERFAMILY Homeodomain-like 12 107 IPR009057 -
Accr13g00631 254 Gene3D - 12 65 - -
Accr13g00631 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Accr13g00631 254 MobiDBLite consensus disorder prediction 138 171 - -
Accr13g00631 254 FunFam MYB-related transcription factor 12 65 - -
Accr13g00631 254 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Accr13g00631 254 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Accr13g00631 254 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00631 Accr-Chr13 6891642 6892776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00631 2 205 MYB Transcription Factor Family AT2G31180 47.805 3.45e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr13g00631 Myb_DNA-binding 8.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00631 K09422 - pop:7498161 243.432