Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00630 ATGGACAAGATGAAGAACCCATTCCGTTTTCTCTCTCTTCTTGTCCTCTGTTTCTCCTGTCGCATCATACCTTCTCTCGCAACTGATTCCATCTCTGCAAATCAAACTCTTTCTGGGGATCAAACTCTCATCTCATCAGGTGGTGTCTTCGAATTGGGTTTCTTCAATCCAGGTAACTCCTTAAACTACTACATAGGCATCTGGTATAAAAAGATCTCGACAAAGACCGTTGTTTGGGTCGCAAACAGAGACAGCCCTGTCTCTGATAAAAATTCAGCCAAGTTAGTTGTATCAAACGGTAATTTAGTTCTCCTCAACGAGTCCCAAATCCCAGTTTGGTCCACAAATTTGACTTCCTCCACCTCGGATTCTGCTGTAGCTATACTCTTAGATTCTGGGAATCTCCTCCTAAGAAAGCTAGAATCTTCAGAAAACTTATGGGAGAGTTTTGATAACCCAACCCACATATTTCTTCCTGGTGGTAAAATCAAACTCAACAATAAGACAAAACAGCCTCAATATCTCACTTCATGGAAGAACACAGAAGATCCTGCTCAGGGTCTCTTCTCCTTGGAGCTAGACCCGAAAGGAACAACCGCGTACTATATTCTTTGGAACAAGTCTGAACAGTATTGGACAGGTGGTCCTTGGAATGGCCAAACTTTCAGCTTGGTCCCTGAAATGAGGTTGAATTTCTTATACAATTTCACCTTTGTTTCAAATGAGAATGAGAGCTATTTCACTTACTCCATGTATAACACTTCTATTATATCTCATATGGTGATGGGTGTCTCGGGGCAAATCCAGCAACTCTCATGGCTTGAAAGCGCCCAACAGTGGAATTTGTTTTGGTCACAGCCTAGACGACAATGCGAGGTTTATGCTTTCTGTGGAGGCTTTGGGAGCTGCAATGAGAATTCCCTGCCTTTTTGTTCTTGCTTGACTGGTTTCGAGCCAAAGTCACCAACTGATTGGGATCTGCAGGATCACTCAGGTGGGTGTGTGAGGAAAACCAAGTTGCAATGTAAGAATCCAAGTTCATCAAATAGTGAGAAAGATTGGTTTTTGGCGATGCCAAACGTGACCTTACCTAAACATGCACAATCTGTAGGAGTAGGGAATGCTGGTGAATGTGAATCCACGTGCTTGAAGAATTGTTGTTGTGCTGCTTATGCTTATGACAGTAACGGTTGTTCTGTTTGGAATGGAGATTTATTAGGTGTGCAGCAGCTTTCTCAAGATGACAGTAATGGAGAAACTTTCTATCTAAAACTTGCAGCTCCTAAGTTTCCAGATGCTAAACACAAAAAGCAAGAAATTATTGGTATTGTGGTAGGCTTGGTTGGAGGTGTAGGTGTTTTCCTAGCAATTTGCCTCTTTGTGATGATGAGAATGAAAAAGAGAGGAGTTGGATTAAGAAGAACGGTGGCAAGTTCTTCAATGGCATTTAGGCATTGTGGAGAAATTATTGGTATTGTGATGGGGATTATAGGTGGTTTAGGGGCTCTCCTGGCCATTCTACTATTTGTGATATTCAGAAGAAGAAGTCTAGTTGGAAAAGGAAAATCGGTGCAGGGTTCATTGGTGGCATTTGGGTACAGGGATTTACAAAATGCAACCAAGAATTTCTCTGAAAAACTTGGAGGAGGAAGTTTTAGTTCTGTTTTCAGAGGCACATTGCCGGATTCTAGTGTTATAGCAGTGAAGAAACTTGAAAGAATAAGCCAAGGTGAGAAACAGTTTAGATCAGAAGTCAGCACTATAGGCACAATCAAGCATGTTAATCTTGTTCGTCTTCGTGGTTTTTGCACTGAAGGCAACAAAAAGTTTCTAGTTTATGATTACATGCCAAATGGCTCATTGGATGCCCATCTGTTTCAAGAAGAGAACTCCAAGAATTTAGAATGGAAGGTAAGGTACCAAATCGCTTTAGCAACAGCCAGGGGATTAAATTACCTCCACGAGAAGTGTAGAGACTACATTATACATTGTGACATAAAGCCAGAGAACATTCTATTAGATTTTGACTTTTGTCCGAAAATTGCAGACTTTGGCCTCACAAAGCTTGTTGGAATGGAAATCAACAGAATCCTCACAACAATGAGAGGGACAAGAGGTTATCTAGCTCCAGAGTGGATTTCTGGTGTGGCTATCACACCAAAAGTTGATGTTTACGGTTATGGAATGATGCTATTTGAATTGGTGTCAGGAAGAAGAAACTCGGAGCCATCAAAAGATGGTCAAGTGAAGTTCTTTCCTACATGGGCTGCAACTGTAGTAATCCAAGGAGGCGATGTTCTTGAGCTTTTGGATCCTACATTAGAGAGGAAAGCAGACATTGAGGAGGTGACTAGGATAATAAAAATTGCTTCATGGTGTGTACAAGATGAAGAGTCAAACAGGCCATCCATGTGTCAGATAGTTCCAATTCTTGAGGGATTTTTGGATATGAGTTTGCCTCCAATACCAAGATCCCTCCTACTGTTTGTTGACAGCTAG 2499 0.4146 MDKMKNPFRFLSLLVLCFSCRIIPSLATDSISANQTLSGDQTLISSGGVFELGFFNPGNSLNYYIGIWYKKISTKTVVWVANRDSPVSDKNSAKLVVSNGNLVLLNESQIPVWSTNLTSSTSDSAVAILLDSGNLLLRKLESSENLWESFDNPTHIFLPGGKIKLNNKTKQPQYLTSWKNTEDPAQGLFSLELDPKGTTAYYILWNKSEQYWTGGPWNGQTFSLVPEMRLNFLYNFTFVSNENESYFTYSMYNTSIISHMVMGVSGQIQQLSWLESAQQWNLFWSQPRRQCEVYAFCGGFGSCNENSLPFCSCLTGFEPKSPTDWDLQDHSGGCVRKTKLQCKNPSSSNSEKDWFLAMPNVTLPKHAQSVGVGNAGECESTCLKNCCCAAYAYDSNGCSVWNGDLLGVQQLSQDDSNGETFYLKLAAPKFPDAKHKKQEIIGIVVGLVGGVGVFLAICLFVMMRMKKRGVGLRRTVASSSMAFRHCGEIIGIVMGIIGGLGALLAILLFVIFRRRSLVGKGKSVQGSLVAFGYRDLQNATKNFSEKLGGGSFSSVFRGTLPDSSVIAVKKLERISQGEKQFRSEVSTIGTIKHVNLVRLRGFCTEGNKKFLVYDYMPNGSLDAHLFQEENSKNLEWKVRYQIALATARGLNYLHEKCRDYIIHCDIKPENILLDFDFCPKIADFGLTKLVGMEINRILTTMRGTRGYLAPEWISGVAITPKVDVYGYGMMLFELVSGRRNSEPSKDGQVKFFPTWAATVVIQGGDVLELLDPTLERKADIEEVTRIIKIASWCVQDEESNRPSMCQIVPILEGFLDMSLPPIPRSLLLFVDS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00630 832 Gene3D Transferase(Phosphotransferase) domain 1 616 818 - -
Accr13g00630 832 SMART ntp_6 350 425 IPR003609 -
Accr13g00630 832 ProSiteProfiles Bulb-type lectin domain profile. 28 150 IPR001480 -
Accr13g00630 832 PIRSF SRK 3 832 IPR024171 GO:0004674
Accr13g00630 832 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Accr13g00630 832 SMART blect_4 34 153 IPR001480 -
Accr13g00630 832 FunFam Receptor-like protein kinase 4 509 615 - -
Accr13g00630 832 Pfam D-mannose binding lectin 76 179 IPR001480 -
Accr13g00630 832 Pfam Protein kinase domain 544 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00630 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 616 821 - -
Accr13g00630 832 FunFam Serine/threonine-protein kinase 23 150 - -
Accr13g00630 832 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Accr13g00630 832 CDD PAN_AP_plant 338 426 - -
Accr13g00630 832 SMART serkin_6 541 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00630 832 ProSiteProfiles Protein kinase domain profile. 541 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00630 832 Pfam PAN-like domain 349 406 IPR003609 -
Accr13g00630 832 SUPERFAMILY Protein kinase-like (PK-like) 526 811 IPR011009 -
Accr13g00630 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 218 IPR036426 -
Accr13g00630 832 Gene3D - 24 150 IPR036426 -
Accr13g00630 832 CDD B_lectin 34 153 IPR001480 -
Accr13g00630 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Accr13g00630 832 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
Accr13g00630 832 Gene3D Phosphorylase Kinase; domain 1 512 615 - -
Accr13g00630 832 PANTHER OS07G0415500 PROTEIN 10 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00630 Accr-Chr13 6868429 6870927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00630 500 821 Receptor kinase-like Gene Family AT5G20050 38.268 5.99e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr13g00630 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00630 - - gmx:100305421 1124