Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00628 ATGAAGAACCTATGGTGCTTGCTCTCTATTCTTCTCCTCTGTTTCTCCTTTCACACCATACCTTCACTGGCTGCTGATTCCATCTCTGCAAATCAGACCCTTTCTGGGGATCAAACTATCATCTCATCAGGTGGTGTCTTCGAATTGGGTTTCTTCAATCCAGGTAACTCCTCAAACTACTACGTTGGAATCTGGTATAAAAAGGTCTCGACACCGACCTATGTTTGGGTCGCAAACAGAGACAGCCCTGTTTCTGATAAAAATATAGCCAAGTTAGTTGTATCAAACGGTAATTTGGTTCTCCTCAACGAGTCCCGAATCCCAGTTTGGTCCACAAATTTAAATTCCACAACCTCCAAGTCTGTTGTTGCTGTACTCCTGGATTCTGGCAATCTCGTCCTAAGAGACAAGCTGGAATCTTCAGAAAACTTATGGCAGAGTTTTGATAACCCAACCGACACGTGGCTTCCTGGAGGTAAAATTAAACTCGACAATAAAACAAAGAAGCCTCAATATCTCACTTCATGGAAGAACAGCGAAGATCCTGCTCAGGGTCTCTTCTCCTTGGAGCTAGACCCGAATGGAACCACCGCGTACTTTATTCTTTGGAACAAGTCTGAACAGTATTGGACAAGTGGTCCTTGGAATGGCCAAATTTTCAGCTTGGTCCCTGAAATGAGGGCGAATTTCTTATACAATTTCACCTTTATTTCAAACGAGAATGAGAGTTATTTCACTTACTCCATGTGGAACTCTTCTATTATATCTCGTTTCGTGATGTCAATCTCGGGACAGATCCAACAACTGTCATGGCTGGAAAGTTCCAAGCAGTGGAATTTGTTTTGGTCTCAACCAAGACGACAGTGTGAGGTTTATGCTTTTTGTGGCTCATTTGGGAGCTGCAATGAGAATTCCCAGCCTTTTTGTACCTGCTTGACTGGTTTCAAGCCAAAGTCGCAAACTGATTGGGATCTGCAGGATCACTCTGGTGGGTGTGTGAAGAAAACCAAGTTGCTATGTGAGAGTCCAAGATCATCCAACGGAGAGAAAGATGGGTTTTTGGCAATGCCAAACGTGGCCTTACCTAAACATGCACAACCTGTAGGAGTAGGGAATGCTGGTGAATGTGAATCCACGTGCTTGAACAATTGTTCTTGTGCTGCTTATGCTTATGACAGTAACGGTTGTTCTGTTTGGAATGGAGATTTATTAAGTGTGCAGCAACTTTCTCAAGATGACAGTAATGGGAAAACTTTCTATCTAAAACTTGCAGCTTCTGAGCTTCCTGACACTAAAAGGAAAAAAGGAGAAGTTATTGGTATTGTGGTGGGCGTTGTCGGTGGTTTAGGGGTTCTCCTGGCCATTCTGCTGTTTGTGATAATCAGAAGGAGGAGAAGAATTGTTGGAAAAGGAAAATCGGTGGAGGGTTCATTGATGGCATTTGGGTACAGAGATTTACAAAATGCAACCAAGAATTTCTCTGAAAAACTAGGAGGAGGAGGATTTGGTTCTGTTTTCAAAGGCACATTGGCGGATTCTAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATAAGCCAAGGAGAGAAACAGTTTCGATCAGAAGTCAGTACTATAGGTACAGTCCAACATGTGAATCTTGTTCGCCTTCGTGGCTTCTGTTCTGAAGGAGATAGAAAGCTTCTGGTTTATGATTACATGCCAAATGGCTCATTGAATGCCCATCTCTTTCAAGAAAAGGACTCCCAGAAATTAGAATGGAAATTAAGGTACCAAATTGCTCTTGGTATAGCCAGGGGACTAACTTATCTCCACGAGAAGTGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAAAACATTCTGTTAGATTCTGATTTTTGCCCAAAAGTTGCAGACTTTGGCCTCGCAAAGTTAGTTGGAAGGGATTTCAGCAGAGTTCTCACAACCATGAGAGGAACAAGAGGTTACCTTGCCCCGGAGTGGATATCTGGTGTGGCCATCACGGCAAAAGCTGATGTTTACAGCTACGGAATGATGCTTTTTGAATTTGTGTCAGGTAGGAGGAATTCTGAGGCATCTGAAGATGGTCAAGTGAAGTTCTTTCCTACATGGGCTGCAAATGTAGTAAGTCAAGGAGGTGATGTTCTCGACCTTTTAGATCCTTCATTGGAGCGAAATGCAGACATTGATGAGCTGACTAGGATAATAAAACTTGCTTCATGGTGTGTACAAGATGAAGAGAGTCACAGGCCTTCCACGGGTCAGATAGTTCAAATACTTGAAGGTGTTTTGGATGTGAATTTGCCTCCTATTCCAAGATCCCTCCGACTGTTTGTTGAAAACCAGGAGAACATAGTTTTCTTCACTGACTCGAGCTCCAACCAGAGTTCACAGACAAGAAGCAACCCCTCAGCTGCATCTGGTCAAGCCAAAAGCAACATCTCATCGTCAAGCTCCTAG 2463 0.4328 MKNLWCLLSILLLCFSFHTIPSLAADSISANQTLSGDQTIISSGGVFELGFFNPGNSSNYYVGIWYKKVSTPTYVWVANRDSPVSDKNIAKLVVSNGNLVLLNESRIPVWSTNLNSTTSKSVVAVLLDSGNLVLRDKLESSENLWQSFDNPTDTWLPGGKIKLDNKTKKPQYLTSWKNSEDPAQGLFSLELDPNGTTAYFILWNKSEQYWTSGPWNGQIFSLVPEMRANFLYNFTFISNENESYFTYSMWNSSIISRFVMSISGQIQQLSWLESSKQWNLFWSQPRRQCEVYAFCGSFGSCNENSQPFCTCLTGFKPKSQTDWDLQDHSGGCVKKTKLLCESPRSSNGEKDGFLAMPNVALPKHAQPVGVGNAGECESTCLNNCSCAAYAYDSNGCSVWNGDLLSVQQLSQDDSNGKTFYLKLAASELPDTKRKKGEVIGIVVGVVGGLGVLLAILLFVIIRRRRRIVGKGKSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLADSSVIAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGDRKLLVYDYMPNGSLNAHLFQEKDSQKLEWKLRYQIALGIARGLTYLHEKCRDCIIHCDIKPENILLDSDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEASEDGQVKFFPTWAANVVSQGGDVLDLLDPSLERNADIDELTRIIKLASWCVQDEESHRPSTGQIVQILEGVLDVNLPPIPRSLRLFVENQENIVFFTDSSSNQSSQTRSNPSAASGQAKSNISSSSS 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00628 820 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Accr13g00628 820 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00628 820 CDD STKc_IRAK 497 763 - -
Accr13g00628 820 CDD B_lectin 31 151 IPR001480 -
Accr13g00628 820 Gene3D Transferase(Phosphotransferase) domain 1 566 769 - -
Accr13g00628 820 SUPERFAMILY Hairpin loop containing domain-like 351 414 - -
Accr13g00628 820 SMART serkin_6 491 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00628 820 MobiDBLite consensus disorder prediction 791 820 - -
Accr13g00628 820 Gene3D - 21 148 IPR036426 -
Accr13g00628 820 FunFam Serine/threonine-protein kinase 20 148 - -
Accr13g00628 820 FunFam Serine/threonine-protein kinase 458 565 - -
Accr13g00628 820 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Accr13g00628 820 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Accr13g00628 820 FunFam Serine/threonine-protein kinase 566 769 - -
Accr13g00628 820 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Accr13g00628 820 CDD PAN_AP_plant 336 424 - -
Accr13g00628 820 Gene3D Phosphorylase Kinase; domain 1 459 565 - -
Accr13g00628 820 Pfam PAN-like domain 348 406 IPR003609 -
Accr13g00628 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Accr13g00628 820 Pfam D-mannose binding lectin 73 177 IPR001480 -
Accr13g00628 820 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00628 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 216 IPR036426 -
Accr13g00628 820 PANTHER OS07G0415500 PROTEIN 6 773 - -
Accr13g00628 820 SMART ntp_6 348 423 IPR003609 -
Accr13g00628 820 SMART blect_4 31 151 IPR001480 -
Accr13g00628 820 PIRSF SRK 1 813 IPR024171 GO:0004674
Accr13g00628 820 SUPERFAMILY Protein kinase-like (PK-like) 476 800 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00628 Accr-Chr13 6821944 6824406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00628 432 768 Receptor kinase-like Gene Family AT1G56120 43.732 9.30e-78 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr13g00628 Pkinase 7.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00628 - - gmx:100782119 1244.57