Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00626 ATGAAGAATTGCGAGCTGTGCAGGATGCCGGCGAGGACTTACTGTGAATCGGACCTTGCTAGTTTATGTTGGGACTGCGATGCCAAGGTTCACGGAGCTAATTTCTTGGTTGCCAGGCACTCCAGGACCCTTCTATGCCATGCGTGCCAATCTCTGACGCCGTGGAAAGCCTCCGGTGCTGTTCTCGGAAACACCGTTTCGGTTTGCCGGAACTGCGACGGAGGAATGAACTTAAGCGGTGAGGACAACGACCAAAGCGAGGGAGGCAATGACAGCGAAATAAACTCTGATGATGACGACGACGACGCCGACGCCGTGCTTGACGGAAACAACGATGACGCCGCCGCCGGCGATGAGGTAGGCGGTGATGTGGAGGCGGATCATCAATTAATCCCTTGGTTCTCCACGACGCCCCCACCGCCGGAGAGTTCTTCGAGCAGCGATGAGTCTAATTACGGCAATAGAAATGCCTCTGAATCAGGAACAACAGCTTCCTTGAAACGAAGGCGTGAAAATGCATCCAATCATGATTTCCAGGACGGTCAGGGCCCAACTGATGGCGGGTGA 567 0.545 MKNCELCRMPARTYCESDLASLCWDCDAKVHGANFLVARHSRTLLCHACQSLTPWKASGAVLGNTVSVCRNCDGGMNLSGEDNDQSEGGNDSEINSDDDDDDADAVLDGNNDDAAAGDEVGGDVEADHQLIPWFSTTPPPPESSSSSDESNYGNRNASESGTTASLKRRRENASNHDFQDGQGPTDGG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00626 188 MobiDBLite consensus disorder prediction 77 188 - -
Accr13g00626 188 CDD Bbox1_BBX-like 4 45 - -
Accr13g00626 188 MobiDBLite consensus disorder prediction 86 108 - -
Accr13g00626 188 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 180 - -
Accr13g00626 188 MobiDBLite consensus disorder prediction 140 163 - -
Accr13g00626 188 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Accr13g00626 188 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Accr13g00626 188 SMART bboxneu5 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00626 Accr-Chr13 6801476 6802184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00626 2 102 C2C2-CO-like Transcription Factor Family AT4G27310 58.252 7.67e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr13g00626 zf-B_box 2.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00626 - - qsa:O6P43_028736 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03224 1 68972136 68972941 Accr13g00626 13 6801476 6802184 CCT
Accr13g00626 13 6801476 6802184 Accr13g00626 13 6801476 6802184 ECH