Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00624 ATGGCAAATACAGAAAGAATAGTTGGAACTTATGGTTATATGGCTCCAGAGTATGCATTAGACGGGTTACTTTCAATCAAATCAGATGTTTTTAGTTTCGGAGTGGTGTTACTTGAAATGATCAGTGGAAAAAAGAACACAGGATTCTTTCAATCCAAGCAAGGTTCCAGCCTTCTGGGTTATGCATGGAGGCTATGGACAGAGAACAAGCTGTTGGATTTAATGGATGCATCTTTGAGTGAAAGCTGCGATCCAAATCAATTCTTCAGGTGTGCGCAAGTTAGTTTGTTGTGCATACAAGATGAAGCAGGAGACAGGCCAACCATGTCACAGGTTTTGATAATGCTTGAAAGTGACACTGCAAGCCTCCCAACTCCAAAGCAACCAACCTTTTTTATGACAAGAGACAAAGGCCTTCCTGTCTCTGGTTCTTCTTCTAGCAAGCCTGAAGGAATTCTTCCAACTGATAGTTCCTATCAACAAGGTCGATAG 492 0.4167 MANTERIVGTYGYMAPEYALDGLLSIKSDVFSFGVVLLEMISGKKNTGFFQSKQGSSLLGYAWRLWTENKLLDLMDASLSESCDPNQFFRCAQVSLLCIQDEAGDRPTMSQVLIMLESDTASLPTPKQPTFFMTRDKGLPVSGSSSSKPEGILPTDSSYQQGR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00624 163 ProSiteProfiles Protein kinase domain profile. 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00624 163 SUPERFAMILY Protein kinase-like (PK-like) 4 142 IPR011009 -
Accr13g00624 163 MobiDBLite consensus disorder prediction 139 163 - -
Accr13g00624 163 Gene3D Transferase(Phosphotransferase) domain 1 1 128 - -
Accr13g00624 163 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 140 - -
Accr13g00624 163 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 121 - -
Accr13g00624 163 Pfam Protein tyrosine and serine/threonine kinase 11 113 IPR001245 GO:0004672|GO:0006468
Accr13g00624 163 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00624 Accr-Chr13 6750645 6751306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00624 3 133 Receptor kinase-like Gene Family AT4G23140 51.825 1.37e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00624 PK_Tyr_Ser-Thr 2.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00624 - - pcin:129318677 275.789