Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00623 ATGAGAACTAACGTCGCAGTGTTCCTGTTCATCTTCACAAACTGGTTGCTCTGGTTTTCTCAGCTCCATTTGGCTCTGGATATTTTGAAGCCAGGCGAAAAGATTACTGGCAATGAAACGCTGGTTTCAAATGGAGGCAAATTTGAAATGGGTTTCTTTTCCCCTCGAAAAGATGCGAGCAGGTACCTGGGAATATGGTACGGTGGGTTACAACCACGAACAGTGGTATGGGTTGCAAACAGAGACCACCCTGTTCTAGATTCCCCTGCATTTTTCCAAATATCAGAGGAAGGAAATGTCATAGTATCAGACATGAACGGAAAGATCTACTGGTCTTCGGAACTTGAGGGATCTTCCTCCTTAAACCGTGCAGTGAAGCTAATGGATTCAGGAAACCTGATTCTGTTCGATGACCGGGTGAGTATAAATAATCTCTGGCAGAGCTTTGAACATCCAACGGATACATTTCTGCCTTACATGGAAATGGATAAAAACATAAAGTTGACATCTTGGAGAACCGTTGATGACCCTGCATCTGGGGATTTCACCTTTCAGCTTGCTCAAACAGGGGACAACAGCTACATCATTTTGAAAGACCAGGTCCATCTTCACTGGCAACCTTCAGACGCAGTACCCTCGACGATATCAAACTTGCTGACAAACTTCACTCGGAGCCCCCAGTCGAAGAAGAACGTAGCGAGGTCAATTGGGAATCTTACGAAGCCGGAAGGTGTGTATAAACTTGTCATGAATTACACAGGGAAGATCGAATTTCAGTGGTACGATGATAAGTTCGGAAGTGGATGGTCAACGGGATTTAGTGAACCATCTGGAACGTGTAAGATACATGACGCTTGCGGGAGCTTTAGCAGCTGCAATGATAACAATAACCCTCCCTGCAACTGTTTGCCTGGGTTTCATCCTGAGTCACTACCACAAAATTCCGCCGAAGAGCAGTTTAATGGGTGTTTCAGAAAAACAACATCGTGTGAGAGAAAAGACGTTGCGTTCTTAAACTTGACGAATGTTGAAATTCGAAGCTCGGACCAGCAAGTCGAAGCAGAAAGTGAAGCAGTATGCCAGTCTAAATGCCTTGAGCTGTGCCCTAGATGCCAGGCTTATTCATATAATGTTAGACTGTCGGATCGGAGTTCAGTTTGCTTGATCTGGACTCGGGATTTATCCACTCTTCAAGAACATTCCCTTCAAAATGGCATTTCTCTTTCTGTCCGGTTACTGATTTCAGACATAGCATCAAATGCCAGGGCCTGTGAACCTTGCGGCACGATAATAGTTCCATATCCACTAAGCACAGGGCCAAATTGTGGAGATCCCTTGTATTTCAAGTTAAACTGTGACAATTCAACAGGTGATCAGCTTAACTTCCAAATGCCTGGACTTGGACCAAGTCGTGTAGTTAAAATACATCCAGATGATCGGAAGTTGATTATCCAAATCCAAGGTTCAGACGTCTGTGTTGATAAAGAGAACCACAGAGGAAAGCTTGATTCACCGTTTAACGTAACCAACTGGTGCTTTGCTCAAGATAAAATAGAGGTTAGTTGGCTTCCACCATTAGAACCTCTCTGTCATAACTCTACAGACTGCAGCGATTGGCCACATTCTACATGCAACGATGATTCAAAAGATGAAAAACGAAGGTGTCTTTGTAATGAAAACTATTACTGGAACAACTCAACTCTAAATTGCACCTTAGGTGTGTCACAAGAATCATCTGGAAGAAAAAAACCACTCACTCTAATTCTTGTGGTTACTCTCTCAAGTGTGGCTTTTGTGGCATGCGTGGTTTGTTTTGCCTATAAATGGAAAAGGATAATGGCCCATAAGAAAGACAGGGGAAGAGTTCAGAGAATTCGAGGGATGTATGACAGCGAAAGACAAGTGAAAGATTTGATAGACTTGGGAGAACTAGAAGAAAAAGATAATGAAGGCATTGAGGTACCATATTTTGATTTTGAAACCATACTAGCAGCTACAGATGACTTTTCAGATGCAAACAAGCTTGGACGAGGAGGTTATGGCTCTGTTTATAAGGGTATATTACCGGGCGAGCAATATATTGCAGTGAAGAGGCTTTCAAATGTTTCCTCACAAGGTTTAAAGGAATTCAAGAATGAAGTTGTTTTGATATCCAAACTACAACATCGAAACCTTGTCAAACTTCGAGGCTATTGCATAACTGGAGATGAAAAGATCTTACTTTATGAATACTTGCCAAACAAGAGCCTAGACACATTCTTGTTCAATCCTACACGAAGTCTAATTTTAGATTGGCAGATGCGGTTTGACATAATTCTTGGAGTTGTTCGAGGGATGTTATACCTTCATCAAGACTCTAGATTGAGAGTAATTCATAGAGACTTAAAAACTAGTAACATACTTCTCGATGAGGAAATGAATCCAAAAATTTCAGACTTTGGTTTGGCTAGAATATTTGGAAACAAAGAGATTATGGCTAACACAGAGAGAATAGTTGGAACTTATGGTTATATGGCTCCAGAGTATGCATTAGACGGGTTACTTTCCATGAAATCAGATGTTTTTAGTTTCGGTGTGGTGGTACTTGAAATTATCAGCGGAAAAAAGAACACAGGATTCTTTCAATCCAAGCAAGGTTCCAGCCTTCTCGGTTATGTAAGTCTCATCTTGTTACTCTGTTAG 2682 0.4165 MRTNVAVFLFIFTNWLLWFSQLHLALDILKPGEKITGNETLVSNGGKFEMGFFSPRKDASRYLGIWYGGLQPRTVVWVANRDHPVLDSPAFFQISEEGNVIVSDMNGKIYWSSELEGSSSLNRAVKLMDSGNLILFDDRVSINNLWQSFEHPTDTFLPYMEMDKNIKLTSWRTVDDPASGDFTFQLAQTGDNSYIILKDQVHLHWQPSDAVPSTISNLLTNFTRSPQSKKNVARSIGNLTKPEGVYKLVMNYTGKIEFQWYDDKFGSGWSTGFSEPSGTCKIHDACGSFSSCNDNNNPPCNCLPGFHPESLPQNSAEEQFNGCFRKTTSCERKDVAFLNLTNVEIRSSDQQVEAESEAVCQSKCLELCPRCQAYSYNVRLSDRSSVCLIWTRDLSTLQEHSLQNGISLSVRLLISDIASNARACEPCGTIIVPYPLSTGPNCGDPLYFKLNCDNSTGDQLNFQMPGLGPSRVVKIHPDDRKLIIQIQGSDVCVDKENHRGKLDSPFNVTNWCFAQDKIEVSWLPPLEPLCHNSTDCSDWPHSTCNDDSKDEKRRCLCNENYYWNNSTLNCTLGVSQESSGRKKPLTLILVVTLSSVAFVACVVCFAYKWKRIMAHKKDRGRVQRIRGMYDSERQVKDLIDLGELEEKDNEGIEVPYFDFETILAATDDFSDANKLGRGGYGSVYKGILPGEQYIAVKRLSNVSSQGLKEFKNEVVLISKLQHRNLVKLRGYCITGDEKILLYEYLPNKSLDTFLFNPTRSLILDWQMRFDIILGVVRGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLARIFGNKEIMANTERIVGTYGYMAPEYALDGLLSMKSDVFSFGVVVLEIISGKKNTGFFQSKQGSSLLGYVSLILLLC 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00623 893 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 176 IPR036426 -
Accr13g00623 893 SUPERFAMILY Protein kinase-like (PK-like) 652 872 IPR011009 -
Accr13g00623 893 PIRSF SRK 1 432 IPR024171 GO:0004674
Accr13g00623 893 PIRSF SRK 519 892 IPR024171 GO:0004674
Accr13g00623 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Accr13g00623 893 ProSiteProfiles Protein kinase domain profile. 669 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00623 893 SMART blect_4 32 152 IPR001480 -
Accr13g00623 893 SMART serkin_6 669 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00623 893 FunFam Receptor-like serine/threonine-protein kinase SD1-8 21 149 - -
Accr13g00623 893 Pfam S-locus glycoprotein domain 216 309 IPR000858 GO:0048544
Accr13g00623 893 SMART ntp_6 332 412 IPR003609 -
Accr13g00623 893 ProSiteProfiles PAN/Apple domain profile. 330 413 IPR003609 -
Accr13g00623 893 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 634 744 - -
Accr13g00623 893 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Accr13g00623 893 CDD B_lectin 35 152 IPR001480 -
Accr13g00623 893 FunFam Lectin-domain containing receptor kinase A4.3 745 889 - -
Accr13g00623 893 Gene3D Transferase(Phosphotransferase) domain 1 745 889 - -
Accr13g00623 893 Gene3D - 20 150 IPR036426 -
Accr13g00623 893 Gene3D Phosphorylase Kinase; domain 1 635 744 - -
Accr13g00623 893 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 871 - -
Accr13g00623 893 Pfam D-mannose binding lectin 74 167 IPR001480 -
Accr13g00623 893 Pfam Protein kinase domain 670 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00623 893 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00623 Accr-Chr13 6715719 6719516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00623 657 886 Receptor kinase-like Gene Family AT4G11530 63.636 8.09e-95 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00623 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00623 - - pcin:129313312 1202.58