Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00621 ATGCTCAACCGTTCTGCAAATCACATGCTCTTTTTTCATGCATTGTTTTTCACTTTTATTATGCATTGTTCTGCTAGGGATGCCATAATCAGGAACAATTTCTTAAGTGAAAGGGAAGGGGATACTCTTATTTCCTCTGGAGAAACATTTGAACTAGGATTCTTCACCCCTAATGGAAGCTCTGGCAGCGGAAGATATGTGGGAATATGGTATTACAGGTCAAATCCACCTACAGTTGTGTGGGTTGCTAACCGAGACAATCCACTTTCTGATGCTGGAGGTGTTCTAGCCATATCTGAGGATGGTAATCTCAGAGTTTTGGATGGAAGTGGGAGATCTCACTGGAGTACAAATCTTGAAACGTCATCTTCAGCGCACAGGACAGTTAAGCTAATGGATAGTGGAAATCTTATTATAAGCGATGAAGAACAAGGAAGTCACTCGGTGAAGATTGTCTGGCAGAGTTTTGAAAATCCAACAGATACATTTCTCCCAGCCATGAAAATGAATGAGAATTTGGTGCTAACTTCTTGGAGAAGTTATGATGATCCGACGCCAGGGAACTTCTCATTTCGGCAAGATCAAGGAGAGAACCAATATATCATATGGAAAAGATCAATCAGATATTGGAAAAGCACTGTGACAGGTACATTTTTTGGGTCAGGTGAAACATCTTCACTAGTATCTTACTTATTGTCGAACTTCACCCAGAGAATATCTCCAAATAACTCTGTACCCTTTCTTACTTCATCTCTGTATGGCGACTCAAGACTAGTTATGACATATTCTGGTCAACTTCAGTATTTGAAGATGGATTCAAAGAAAGTTTGGTACATGGTTTGGGCGGAGCCACGAGATAGGTGCAGTGTGTATAATGCTTGTGGTAACTTTGGCAGCTGCAATAGTAAGTATGATTTTATGTGCAAGTGTTTACCTGGGTTCGCGCCTAACTCGCCAGAAAGTTGGGATTCCGGTGACTTCTCTGGTGGATGCAGGAGGAAAACAAATGTGTGCAGAGAGAATGCCGAGAGTGACAGGTTTTTGAGTTTGAAAATGATGAAAGTAGGGAGCCCGGATTCTCAATTTAATGCTAAGAACGAAATGGAATGCAAGTTAGAATGCCTTAACAATTGCCAATGCTATGCATATTCATATGAAGATCCTAAAATCACAAGGCGGGTTGCTAGTGGTGATGCAGTTTGCTGGATTTGGACTGAAGACTTGAACAATCTCCAAGAAGAGTATGGGAATGGATGTGATCTCAATGTACGTGTGGCATATTTTGATATAGCATCCAATTGCAGGACCTGTAGGACTTGTGGTACAAACTTCATTCCTTATCCACTTAGCACAGGGCCATTTTGTGGTGATCCCATGTACTTGAGTTTTCACTGTAATGTCACTACAGGAGTCCTTAACTTTAATACTCCTGGGGGAACTTATCAAGTAGTAAGCATAAACCCTGAAACTCAAACACTCATGATCGATAGCAGAGACATAGTTGATTGTGAAGGTCAAAATTTGAGGGATAAGCTTCTGCGTTTAAACCAGTCATCTCCATTTCATCTAACTGGCAGATGCAATGCTGATCCAAGCCCCCTTAATACTATTGCTCCTGCAAAAGTTGGTGGGGAAATTGAGTTGAGCTGGGACCCACCATTGGAGCCACTTTGTCGTTCTTTTTCAGACTGTAAGGATTGGCCAGATTCAATTTGCAATGCTTCCAGAGATGGACAAAAGAGATGTCTTTGCAAAACAAACTTTCTTTGGGATGGTTTGAGTTTAAATTGTACCATTGATGGCAGCCGCATCATTCAAACAGGCAGGCGTTTCTCTGCTCCTTTGATTATTGCAGTCCCTATCACTATTGTGATTGTGTTGATTCTTTTATCAAGTACCTTTACCTATGTTTACTTTTGGAGGAGAAGGCTGCTCAAGACAAAAGAGATCAGGGAATGTGTTAGGAAAAAATCAGCGAGGAGCTTGTATGAAAGTGAGAGTTATGTCAAGGATTTGATTGAATCGGGTAGGTTCCGAGAAGATGATGGACATGCCATAGACATCCCACATTTTCATTTGGAAAGCATACTTGATGCTACCAAAAATTTTTCAAATGCAAACAAGCTTGGACAAGGAGGATTTGGTCCTGTCTACAAGGGGAAGTTTCCAGGAGAACAAGAGATAGCAGTAAAGAGACTCTCTAGTTGCTCTGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTATTGATTGCCAAGCTTCAACATCGAAACTTGGTTAGGCTTCTGGGTTATTGTGTTGAAGGAGATGAAAAGATGTTAGTGTATGAATATATGCCGAATAGGAGTCTAGATTCTTTCATATTTGATAGGAAGTCATGTGTTAAATTAGATTGGAGCAAGCGTTTCAAGATTATTTTGGGGATTGCACGAGGGCTTCTTTATCTACACCAAGACTCAAGGCTAAGAATCATCCATAGAGACTTGAAAACAAGCAATATTCTTCTAGATGAAGAGATGAACCCTAAAATCTCAGATTTTGGCTTAGCTAGGATCTTTGAAGGAAAAGAAACAGCAGCAAACACAAGTAGAGTGGTTGGAACTTATGGCTATATGTCTCCAGAATATGCACTAGATGGATTTTTTTCAGTCAAGTCTGATGTGTTTAGCTTTGGTGTGGTGGTACTAGAGATTCTTAGTGGAAAAAGGAACACAGGATTTTACCAGGCAGATCATGAATTGAGTCTTTTAGGCTATGCGTGGCATTTATGGAAAGTAGAGAGAGCACTGGATTATATGGATCAGACTCTATCTCAGACATGCAAGAAAGATGAATATTTGAAGTGTGTAAACATTGGACTGTTGTGCGTACAAGAAGATCCAAATGACCGTCCAACCATGTCCAATGTAGTTTTCATGCTTGGAAGTGATTCTAGTACTTTTCCAACTCCAAAGCCGCCGGCCTTTGTCGTTAGAAGATGCCCTTCTAGCAAAGCTTCCACTACCAGTAAACTGGAATCTTGTTCCCATAATGAATTGACTGTCACTTTAGAAAACGGTAGGTAG 3066 0.4057 MLNRSANHMLFFHALFFTFIMHCSARDAIIRNNFLSEREGDTLISSGETFELGFFTPNGSSGSGRYVGIWYYRSNPPTVVWVANRDNPLSDAGGVLAISEDGNLRVLDGSGRSHWSTNLETSSSAHRTVKLMDSGNLIISDEEQGSHSVKIVWQSFENPTDTFLPAMKMNENLVLTSWRSYDDPTPGNFSFRQDQGENQYIIWKRSIRYWKSTVTGTFFGSGETSSLVSYLLSNFTQRISPNNSVPFLTSSLYGDSRLVMTYSGQLQYLKMDSKKVWYMVWAEPRDRCSVYNACGNFGSCNSKYDFMCKCLPGFAPNSPESWDSGDFSGGCRRKTNVCRENAESDRFLSLKMMKVGSPDSQFNAKNEMECKLECLNNCQCYAYSYEDPKITRRVASGDAVCWIWTEDLNNLQEEYGNGCDLNVRVAYFDIASNCRTCRTCGTNFIPYPLSTGPFCGDPMYLSFHCNVTTGVLNFNTPGGTYQVVSINPETQTLMIDSRDIVDCEGQNLRDKLLRLNQSSPFHLTGRCNADPSPLNTIAPAKVGGEIELSWDPPLEPLCRSFSDCKDWPDSICNASRDGQKRCLCKTNFLWDGLSLNCTIDGSRIIQTGRRFSAPLIIAVPITIVIVLILLSSTFTYVYFWRRRLLKTKEIRECVRKKSARSLYESESYVKDLIESGRFREDDGHAIDIPHFHLESILDATKNFSNANKLGQGGFGPVYKGKFPGEQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDSFIFDRKSCVKLDWSKRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFEGKETAANTSRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEILSGKRNTGFYQADHELSLLGYAWHLWKVERALDYMDQTLSQTCKKDEYLKCVNIGLLCVQEDPNDRPTMSNVVFMLGSDSSTFPTPKPPAFVVRRCPSSKASTTSKLESCSHNELTVTLENGR 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00621 1021 ProSiteProfiles Protein kinase domain profile. 703 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00621 1021 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 779 982 - -
Accr13g00621 1021 SMART serkin_6 703 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00621 1021 ProSiteProfiles Bulb-type lectin domain profile. 28 152 IPR001480 -
Accr13g00621 1021 Pfam PAN-like domain 341 410 IPR003609 -
Accr13g00621 1021 Gene3D Phosphorylase Kinase; domain 1 669 778 - -
Accr13g00621 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Accr13g00621 1021 CDD B_lectin 32 159 IPR001480 -
Accr13g00621 1021 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 184 IPR036426 -
Accr13g00621 1021 Pfam Protein tyrosine and serine/threonine kinase 706 972 IPR001245 GO:0004672|GO:0006468
Accr13g00621 1021 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 668 778 - -
Accr13g00621 1021 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 964 - -
Accr13g00621 1021 SMART ntp_6 342 425 IPR003609 -
Accr13g00621 1021 CDD PAN_AP_plant 338 426 - -
Accr13g00621 1021 CDD STKc_IRAK 709 974 - -
Accr13g00621 1021 Gene3D Transferase(Phosphotransferase) domain 1 779 981 - -
Accr13g00621 1021 Gene3D - 23 157 IPR036426 -
Accr13g00621 1021 Pfam D-mannose binding lectin 78 174 IPR001480 -
Accr13g00621 1021 SUPERFAMILY Protein kinase-like (PK-like) 687 997 IPR011009 -
Accr13g00621 1021 SMART blect_4 34 159 IPR001480 -
Accr13g00621 1021 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 156 - -
Accr13g00621 1021 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Accr13g00621 1021 Pfam S-locus glycoprotein domain 217 317 IPR000858 GO:0048544
Accr13g00621 1021 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00621 Accr-Chr13 6701353 6706351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00621 682 992 Receptor kinase-like Gene Family AT4G23230 59.425 8.03e-124 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g00621 PK_Tyr_Ser-Thr 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00621 - - gmx:100775297 1544.25