Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00602 ATGAAAACTGAGTTAAAAGGAAGTACTACTTCCATTTCCCTTCAATACCCAAGTCTCTTCGACACACCCCACAATAATAATCAAGATCTCTCGGGAGAACTCAAAGGGTGTTTAGGAAGTCTCGATGGAGCTTGTATAGAGAAGCTCTTACTTCATTGTGCTAGTGCTTTAGAGAGTAACGATGTAACTTTAGCTCAACAAGTCATGTGGGTGCTCAATAATGTTGCTTCTCCAATTGGAGACACCAACCAAAGGCTCACCTCGTGGTTCCTCAGAGCCTTAATCTCTAGGGCTTCACGAGTATGTCCTATGAACTTCAACGGACGAAGCAGTACCATCCAGAGAAGGCTAATGTCCGTGACGGAGCTTGCAGGGTACGTTGATCTTATCCCTTGGCATAGGTTTGGGTTTTGTGCTTCTAATAGTGCTATTTTTAAAGCAATTCAAGGGTTTCAAAGAGTGCACATACTAGATTTTAGTATTACCCATTGTATGCAATGGCCTACTCTCATAGATGCTTTGGCCAAAATCCCAGAAGGCCCTCCTGAGGTTAAAATCACAGTGCCTTCTTTTCGGCCGCGTGTCCCTCCTTTGGTCAATATTTCAACAGAAGAAGTTGGGCTGCGTTTGGGGAATTTTGCTAAATTTAGGGATGTCCCTTTTGAATTCAATGTGATTGGAAGGAACACTACATCTTCTGAATTAAGCAATATTAATGATTCATCATCCAGCTTTTTTCCCTTTGAGTCACTGTTAAGTCATTTGAATCCCACTATGTTAAATCTTAGGGAAGACGAAGCTTTGGTGATAAATTGTCAAAACTGGCTACGTTACTTGTCTGATGCAAGAAATGACACTTTCCAAGAAGCATCTCCTAGGGACACTTTCATAAATCTAATCAAAAGTTTTAACCCTAGAATAGTACTTTTAGTTGACGAGGATTGTGATCTTAGTGTCCCGAGTCTCACGTCAAGAATCATCACTTGTTTCAACTATTTGTGGATACCCTTTGATGCTTTGGAGACTTTTTTGCCTAAAGATAGCAACCAGAGGGTAGAGTATGAATCAGACATAGGCCAGAAAATTGAGAACATCATAAGCTTCGAGGGGGATCAGAGAATAGAGAGATTAGAGAGCGGCGCGAAAATGTCGCAGAGGATGAGAAATGGAGGCTTCTTCAACGTTCCATTCTGTGAAGGAACTGTGAGAGAAGTCAAGGCTTTGCTTGATGAGCATGCAAGTGGATGGGGTATGAAGATAGAAGAAGATAATATGTTAGTTCTCACATGGAAAGGCCATAACTCTGTCTTTGCCACAGCTTGGGTCCCACATGAGTTAAACGATCATCTGGGTGTGGGCTGA 1362 0.4192 MKTELKGSTTSISLQYPSLFDTPHNNNQDLSGELKGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPIGDTNQRLTSWFLRALISRASRVCPMNFNGRSSTIQRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGFQRVHILDFSITHCMQWPTLIDALAKIPEGPPEVKITVPSFRPRVPPLVNISTEEVGLRLGNFAKFRDVPFEFNVIGRNTTSSELSNINDSSSSFFPFESLLSHLNPTMLNLREDEALVINCQNWLRYLSDARNDTFQEASPRDTFINLIKSFNPRIVLLVDEDCDLSVPSLTSRIITCFNYLWIPFDALETFLPKDSNQRVEYESDIGQKIENIISFEGDQRIERLESGAKMSQRMRNGGFFNVPFCEGTVREVKALLDEHASGWGMKIEEDNMLVLTWKGHNSVFATAWVPHELNDHLGVG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00602 453 ProSiteProfiles GRAS family profile. 37 442 IPR005202 -
Accr13g00602 453 Pfam GRAS domain family 47 441 IPR005202 -
Accr13g00602 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 431 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00602 Accr-Chr13 6449411 6450772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00602 34 443 GRAS Transcription Factor Family AT3G49950 47.255 1.51e-122 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr13g00602 GRAS 3.3e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00602 - - qsa:O6P43_000622 692.189