Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00599 ATGGCTGCAAAGCGTCTTCTAGAAGACCCACCCCCTGCTTCTCTTTCGGAAGAAGAAGAAGAAACTGAGGACGACGCTGCCGAAGAAGACGAAGAAAACGGTGATTCCGAAGAACTGGAAGACGAACAAGATGAAGATAACCATCAGAAAAACAAGGTCAAGTCTATCGAGGACTCGGTCACCAAATCCGTAGAAGCTTCACAAGACCAATCTTCTTCAGAATCCGGTGATGAATCCGGCTCGGAAACGGAGTCCGACGATACCCGGCCCTCACCAACCGCTTCCGCCTTTACCATCAAACCTATTGCATCCAAACCAATGAAAGATTCCGTACAGCCCCAGAAGAATTCAGCCAGCCGTAAGTTGGCCGTGTCACCAGTGAAGACTGTCTCCGCCGGCGTGAAGCGCTCCAGGGGAAGCGATGATGTTGAAAGAAAAGAGTCAAAGAAGAACAAGGCATCTAATGGTCAAGATGAAGATTTGAAAAGGGGATCAGCTGTTCCTCGCCGTTGGAGTGAAGATGACGAGATTGCGATTTTGAAGGGCATGATCGAGTACCGAGCCGAGAAAGGGACTGATCCTTGGGCTGATATGAAGGCGTTTGTTGGGTTTGTAAATGAAAAGTTTCACGTCGATGTATCTTTGGAGCAATTAAAGAACAAAATCAAGAGGCTGAAACAGAAATACCAAGGCGTTGCAGAAAAGAGTAAAAATGGTGAAGTCCCTGTTCTGGGCAAGTCACATGACTACAGGATTTTTGATCTGTCCAAAAAAATTTGGGAAGCTTCCGTGACCAATGGGATGGAAGGTAGTGCTAAGAAAAAGAGAAAGCCAAAGCCAACTCAGAGCGAACCCAACACTTCTGCTTCAGCATTACCAAATGGTGAGATTATTGTTGAACCAACAAGGCCTAATTCGTCATTCTATGATGCCTTACTGGTACAAGGGAAGCTTATGTCGATACCAGATGGTGCTGCAAACTTCATGAAGGAAGCTCTGCCGTTGATGGGGAGTGCGAAGGCCGGGGAATTGGAAAGCAAGTGGAGGAAGTTGCAGGAAGCTGAATTGAAATTGTACTTGAAGAAGGTTGAGTTGGTTCGTGACGCTGCTAAACAGATGTTAGAAGCGATGAAATCATCCACGTCTTAG 1149 0.4656 MAAKRLLEDPPPASLSEEEEETEDDAAEEDEENGDSEELEDEQDEDNHQKNKVKSIEDSVTKSVEASQDQSSSESGDESGSETESDDTRPSPTASAFTIKPIASKPMKDSVQPQKNSASRKLAVSPVKTVSAGVKRSRGSDDVERKESKKNKASNGQDEDLKRGSAVPRRWSEDDEIAILKGMIEYRAEKGTDPWADMKAFVGFVNEKFHVDVSLEQLKNKIKRLKQKYQGVAEKSKNGEVPVLGKSHDYRIFDLSKKIWEASVTNGMEGSAKKKRKPKPTQSEPNTSASALPNGEIIVEPTRPNSSFYDALLVQGKLMSIPDGAANFMKEALPLMGSAKAGELESKWRKLQEAELKLYLKKVELVRDAAKQMLEAMKSSTS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00599 382 MobiDBLite consensus disorder prediction 60 78 - -
Accr13g00599 382 PANTHER BNAANNG10740D PROTEIN-RELATED 13 375 IPR007592 GO:0006355
Accr13g00599 382 MobiDBLite consensus disorder prediction 135 168 - -
Accr13g00599 382 MobiDBLite consensus disorder prediction 109 124 - -
Accr13g00599 382 Pfam Protein of unknown function, DUF573 168 261 IPR007592 GO:0006355
Accr13g00599 382 MobiDBLite consensus disorder prediction 45 59 - -
Accr13g00599 382 MobiDBLite consensus disorder prediction 267 295 - -
Accr13g00599 382 MobiDBLite consensus disorder prediction 13 44 - -
Accr13g00599 382 Coils Coil 215 235 - -
Accr13g00599 382 MobiDBLite consensus disorder prediction 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00599 Accr-Chr13 6422668 6423816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00599 7 379 GeBP Transcription Factor Family AT1G61730 28.535 1.00e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Accr13g00599 DUF573 1.4e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00599 - - pcin:129314672 478.018