Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00597 ATGAGAGAAGAGGAACTCGAGGGTGTGTTATTCGGAAAATACGAAATCCGTAGGTTACTTGGCTCTGGAGCTTTTGCTAAGGTATACGAAGCTCACAATCTTCTAACGAAGAAGCGTGTGGCCGTTAAGGTCGTGAGCAAGCGCGGCATGACGGAGCAGTTTCAGACGGAAATTTCTACCATGCGCCGGCTGAAACATCCACACATCGTGGAACTCTACGAGGTCCTCGCCACCGAAACAAAGTTTTTCCTCATCATGGAGCTCGTAATAGGCGGCGAGCTCCACCACAAATTCGTTAACGACGGCCCCTTCAGCGACGATCAGCTCCGTCGCTGGTTCCGACAGTTAATCTCAGCCATCCAGCACTGCCATTCTCACGGCGTGTGTCACCGAGATTTGAAGCTTGATAACATCCTTCTTGACCAGAATTTGAGCATCAAGGTTTCAGACTTCGGGTTGAGCGCCACAAGAAGCAATGTCCGATGGGACGGCAAGCTTCAGGCTGTCTGCGGGACCCCTCCTTACATGGCCCCCGAGATGCTCAACGGTAAAGGGTACGACGGAGATAAAGTGGATGTGTGGCAGTGCGGTGTTGTACATGCTCACATTCAAGGCTATACCGTTCACCGGCCCCGAATAGGAGAATTTCCCCTGGCGAGGTTTGCATCCCCCGTCGTAGGGTATCCGAGCTTTTGA 696 0.523 MREEELEGVLFGKYEIRRLLGSGAFAKVYEAHNLLTKKRVAVKVVSKRGMTEQFQTEISTMRRLKHPHIVELYEVLATETKFFLIMELVIGGELHHKFVNDGPFSDDQLRRWFRQLISAIQHCHSHGVCHRDLKLDNILLDQNLSIKVSDFGLSATRSNVRWDGKLQAVCGTPPYMAPEMLNGKGYDGDKVDVWQCGVVHAHIQGYTVHRPRIGEFPLARFASPVVGYPSF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00597 231 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Accr13g00597 231 Gene3D Transferase(Phosphotransferase) domain 1 6 215 - -
Accr13g00597 231 FunFam Maternal embryonic leucine zipper kinase 5 208 - -
Accr13g00597 231 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 199 - -
Accr13g00597 231 ProSiteProfiles Protein kinase domain profile. 14 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00597 231 Pfam Protein kinase domain 14 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00597 231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Accr13g00597 231 SUPERFAMILY Protein kinase-like (PK-like) 10 203 IPR011009 -
Accr13g00597 231 FunFam Aurora kinase A 7 92 - -
Accr13g00597 231 SMART serkin_6 14 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00597 Accr-Chr13 6398492 6399187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00597 9 224 CBL-interacting serine-threonine protein kinases AT2G30360 48.927 3.94e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr13g00597 Pkinase 4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00597 - K12761 jre:108989952 234.572