Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00569 ATGCCAGCCGGGATTATGATTCCGGCTATGCCCTCCTTGATCGGAAGGAACAACAACGTTGGCGGTGGTTTTGGATCATCCTCAGGCCTTTCTCTTAGTCAGCCAAACATGATGGATGGCCAGCTCCTGCCAGCACTGGACATGGCTCCTAACACATCGGAGAGTGACATCCCGAGAATCCGAGACGACGATTTCGACACCGCCACCAAGTCCGGAAGCGAAAATCAGGAAAACGGCGCCTCCGGTGACGACCAAGACCCACGCCCCAAGAAGAAACGTTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTCAAAGAGTGCCCTCACCCCGATGACAAGCAAAGGAAGGAGCTTAGTCGTGAATTAGGGTTAGAGCCATTGCAGGTCAAGTTCTGGTTCCAAAACAAGCGCACCCAGATGAAGAACCAACATGAGAGGCATGAGAACTCGCACCTAAGAGCCGACAACGAAAAGCTTCGTGCCGATAACATGAGGTACAGAGAAGCTCTTAGCAATGCATCTTGTCCTAACTGTGGTGGACCGACCGCTATAGGAGAAATGTCCTTCGATGAACATCATTTGAGAATCGAAAATGCCCGCCTAAGAGAAGAGATTGATAGAATTTCAGCGATTGCTGCCAAGTACGTAGGGAAGCCAGTGGTGAACTATCCGCTACTTTCTCCCTCTTCGGTTCCACCTCGTCCTTTAGAGCTCGGTGTTGGCAGTGGCTATGGAGGACAGGCTGGGATTGGTGGCAGTGGGGACATGTACGGCAGCGGTGCCGGAGATCTTTTGAGGTCGATAAGCGGGCTCACCGAAGCCGATAAGCCGATGATCATAGAGCTTGCAGTTGCGGCCATGGAAGAACTGGTGAGAATGGCTCAGATGGGAGAGCCTCTTTGGATAACCACCCTCGACGGGTCCACCACTGTGCTCAATGAAGACGAGTACATGAGATCTTTTCCTCGTGGAATTGGCCCTAAGCCTACTGGCCTGAAATGCGAAGCTTCTCGAGAAACTGCTCTAGTCATCATGAATCACGTCAACCTTGTCGAGATTCTCATGGACGTGAACCAGTGGTCAACAGTGTTCTCTGGTATAGTGTCAAGAGCAATGACTATGGAAGTTCTGTCAACGGGGGTGGCTGGGAACTACAACGGTGCTTTGCAAGTGATGACAGCAGAGTTACAAGTGCCTTCACCATTAGTGCCAACTCGAGAGAGTTATTTCGTGAGGTATTGTAAGCAGCACGCTGACGGGACATGGGCAGTGGTGGATGTGTCTCTGGACCATCTCAGCACCGCTCCTGTCAAATGTAGAAGACGACCTTCTGGTTGCTTAATCCAAGAAATGCCCAATGGCTATTCCAAGGTGACGTGGATTGAACATGTAGAAGTGGATGATAGAGGTGTCCATAGTCTATACAAGCAGCTTGTTAGTTCAGGCCATGCATTTGGTGCAAAGCGATGGGTTGCCGCCTTAGATCGACAGTGTGAAAGGCTTGCTAGCGCCATGGCTTCCAACATTCCCACTGGTGATGTTGGAGTGATAACAAACCAAGACGGGAGGAGGAGCATGTTGAAGCTAGCGGAGAGAATGGTGATAAGCTTCTGTGCGGGAGTGAGCGCTTCCACTGCTCACACATGGACAACACTCTCTGGAACCGGGGCGGATGACGTACGGGTCATGACCCGAAAGAGTGTGGACGACCCGGGAAGACCTCCTGGTATTGTTCTCAGTGCTGCAACCTCTTTCTGGCTCCCAGTTCCCCCCAAGCGAGTCTTCGATTTCCTCCGCGATGAAAACTCCAGAAGTGAGTGGGATATTCTTTCCAACGGTGGCGCGGTGCAAGAAATGGCACACATAGCTAACGGACGTGATACAGGGAATTGTGTGTCCCTGCTCAGAGTGAATAGTGCAAATTCGAGCCAAAGCAATATGTTGATACTGCAAGAGAGCTGCACAGACTCAACGGGCTCTTTTGTGATATATGCACCTGTAGATATAGTAGCCATGAACGTGGTTCTGAATGGAGGGGATCCTGATTACGTGGCACTTCTTCCTTCGGGTTTTGCTATCCTACCCGATGGTACCACAGCTCATGGTGGTGGCATTGGTGAAACAGGCCACGGTGGATCGCTCTTGACCGTTGCTTTTCAAATCTTGGTTGATTCTGTGCCCACTGCTAAGCTCTCTCTTGGATCTGTTGCCACCGTCAATAACCTTATTGCCTGCACTGTGGAGAGAATTAAGGCTTCATTATCTTGTGAAGCTCCTTGA 2295 0.5089 MPAGIMIPAMPSLIGRNNNVGGGFGSSSGLSLSQPNMMDGQLLPALDMAPNTSESDIPRIRDDDFDTATKSGSENQENGASGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSHLRADNEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPVVNYPLLSPSSVPPRPLELGVGSGYGGQAGIGGSGDMYGSGAGDLLRSISGLTEADKPMIIELAVAAMEELVRMAQMGEPLWITTLDGSTTVLNEDEYMRSFPRGIGPKPTGLKCEASRETALVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTMEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDHLSTAPVKCRRRPSGCLIQEMPNGYSKVTWIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWVAALDRQCERLASAMASNIPTGDVGVITNQDGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRSEWDILSNGGAVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTAHGGGIGETGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAP 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00569 764 FunFam Homeobox-leucine zipper protein GLABRA 2 286 504 - -
Accr13g00569 764 SUPERFAMILY Homeodomain-like 83 154 IPR009057 -
Accr13g00569 764 MobiDBLite consensus disorder prediction 47 99 - -
Accr13g00569 764 CDD START_ArGLABRA2_like 281 504 - -
Accr13g00569 764 FunFam Homeobox-leucine zipper protein HDG1 76 164 - -
Accr13g00569 764 CDD homeodomain 91 149 IPR001356 GO:0003677
Accr13g00569 764 Gene3D - 354 504 IPR023393 -
Accr13g00569 764 SMART START_1 286 505 IPR002913 GO:0008289
Accr13g00569 764 ProSiteProfiles 'Homeobox' domain profile. 88 148 IPR001356 GO:0003677
Accr13g00569 764 SMART HOX_1 89 152 IPR001356 GO:0003677
Accr13g00569 764 ProSitePatterns 'Homeobox' domain signature. 123 146 IPR017970 GO:0000981|GO:0006355
Accr13g00569 764 ProSiteProfiles START domain profile. 277 508 IPR002913 GO:0008289
Accr13g00569 764 SUPERFAMILY Bet v1-like 525 756 - -
Accr13g00569 764 SUPERFAMILY Bet v1-like 278 507 - -
Accr13g00569 764 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 88 759 IPR042160 -
Accr13g00569 764 Coils Coil 154 174 - -
Accr13g00569 764 MobiDBLite consensus disorder prediction 56 70 - -
Accr13g00569 764 Pfam Homeodomain 91 147 IPR001356 GO:0003677
Accr13g00569 764 Pfam START domain 287 505 IPR002913 GO:0008289
Accr13g00569 764 Gene3D - 76 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00569 Accr-Chr13 6174637 6178452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00569 60 762 Homeobox Transcription Factor Family AT1G05230 81.895 0.0 1161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr13g00569 START 4.2e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00569 K09338 - gmx:100797992 1286.17