Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00552 ATGGGGTTGGTAAAGTCAGCCATAGGAGACGCCATTCTAACCTCAATCTGGGTTTTCAGCATCTCAACTCTCAGAATCATCGCTTCCCAAGTCTCCTCCTTCCTTAACCTCCACCCTTCTTCACTCGCCGGCCTCTTCATCGTCACCGTCATCAACACCATTCTCGTCTTCACCATCAGTCTCATCGGCAGAATCCTCGGCGGCGCTAGCTTCAACCCCTCCACCACCGTCACCTTTTACGCCGCTGGGCTCCGACCCGACTCCTCCCTGACCTCCTTGGCCGTCCGATTTCCTGCTCAGGCAGCAGGTGGGGTTGCCGGAGTTCTTGCTGTTCTTCACCTCATCCCGACCCAGCACAAATCCATGCTTAAAGGTCCTTCCTTGAAGGTTGATTTGCATACTGGGGCTACAGCAGAGAGCGCACTGACTTTTGCTCTCAACTTGACTATTCTTGTTGTTATGTTTCAAGGTCCAAAGAACCCTTTTTTGAAATTGTATTTGATTTCTGTGGCTACTCTGTGTCTGGTTATTCCTGGTTCTGCTTACACAGGACCTTCTATGAACCCAGCTAATGCATTTGGATGGGCTTACGTCAACAATAGGCACAACACTTGGGAGCAGTTTTATGTTTATTGGATATGTCCTTTCATTGGAGCTACTCTAGCTGCTTCCGTTTATCGATTTCTCTTCATGTCACCAGTTAAGCAGAAGAAAGCCTGA 720 0.4903 MGLVKSAIGDAILTSIWVFSISTLRIIASQVSSFLNLHPSSLAGLFIVTVINTILVFTISLIGRILGGASFNPSTTVTFYAAGLRPDSSLTSLAVRFPAQAAGGVAGVLAVLHLIPTQHKSMLKGPSLKVDLHTGATAESALTFALNLTILVVMFQGPKNPFLKLYLISVATLCLVIPGSAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGATLAASVYRFLFMSPVKQKKA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00552 239 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr13g00552 239 Gene3D Glycerol uptake facilitator protein. 1 238 IPR023271 -
Accr13g00552 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Accr13g00552 239 SUPERFAMILY Aquaporin-like 3 233 IPR023271 -
Accr13g00552 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr13g00552 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr13g00552 239 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr13g00552 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr13g00552 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00552 Accr-Chr13 5846097 5846816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00552 1 230 Major Intrinsic Protein MIP AT3G04090 45.217 1.65e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00552 K09875 - qsa:O6P43_000566 352.443