LGRPv2

Gene search

Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr13g00550	883	SMART	ultradead3	190	465	IPR014001	-
	Accr13g00550	883	CDD	DEXDc_SHPRH-like	194	532	-	-
	Accr13g00550	883	SMART	helicmild6	745	828	IPR001650	-
	Accr13g00550	883	MobiDBLite	consensus disorder prediction	1	116	-	-
	Accr13g00550	883	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	623	685	IPR013083	-
	Accr13g00550	883	PANTHER	TRANSCRIPTION TERMINATION FACTOR 2-RELATED	50	883	-	-
	Accr13g00550	883	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	403	882	IPR027417	-
	Accr13g00550	883	SUPERFAMILY	RING/U-box	627	674	-	-
	Accr13g00550	883	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	148	532	IPR027417	-
	Accr13g00550	883	Coils	Coil	701	721	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr13g00550	Accr-Chr13	5806410	5812736	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr13g00550	115	883	RAD5 or RAD16-like Gene Family	AT1G05120	65.278	0.0	1061

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SNF2	Accr13g00550		SNF2_N	2.9e-54	CL0023

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr13g00550	K15083		-	gmx:100798333	1224.15

Showing 1 to 1 of 1 entries