Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00532 ATGTACAACGCTATGATGGATCCTGAGATGATCAGAATTGCTCAGGAGCAGATGAGTCGCATGTCGCCCACCGAGTTTGCTCAGATCCAACAACAGATGATGTCTAATCCAGCGTTAATGAGGATGGCTTCAGAAAGTATGAAGAACATGAGGCCTGAAGACTTCAAACTCGCTGCAGAGCAGTTAAAGCATACTCGTCCTGAACAGATGGCTGAGATTGGTGAGAAGATGGCAAATGCAACACCTGAAGAAATTGCAGCTATGCGTGCCCGTGCTGATGCGCAGATGAAATATGAAATAAGTGGAGCTGAGATGTTGAAGAAGCAGGGCAATGAACTTCACAGTCAGGGAAGATTCCATGAAGCTATGCAGAAGTATTGTCTTGCCAAGCAAAACCTTAGAGAAATTCCATCCTCCCAAAGTAGAAAGCTTCTTTTAGCATGCTCGCTCAATTTGATGTCTTGTTACCTGAAGACGGGGCAGTATGATGAATGTGTAAAAGAAGGTTCTGAGGTTTTGGCTTATGATGCTAAAAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTTGGTCTACTAAAGGATGCTGTTAGTGATTTGAGCATGGCATGTGAAGTTTGCCCTGATGACGATACAGTTTCAAAGCTTTTAAGGGAGACTGAGGAAATGTTGGCAGAGGATGGTGGTGAGCATGCACCTAGAGGATTAGTAATTGAAGAAATAACTGAAGAAGATCAGAATGTTCAGGCACAAAACTCTGGAAGCTCATCTGTTGAGCAAACAGTGGCTAAGCCGAAAACTTCCAATACTTCTTCTAAGAGTTCCAGTACAGTCATCAACGAGAATTCAAAATCAAATATGGAAGGTTTAAATGCATTGAAAAATGATCCTGAAGCTATCAGATCATTTCAAAATTTTATTTCAAATGCCGACCCTGCCACTCTTACTTCTTTGAATGCTGGACAATCCAAAGATATGTCTCCTGATATGATTAGAACTGCCTCAAACATGATTAGCAAGATGTCACCACAGGAACTTCAAAATATGCTAGACATGGCTTCCTCGTATCAGGGGGAAAACCCATTTTTAAGAGGTTCTTCTAATTCTACTGTCAATTCTGGATCAATTCCTCCAAATGTGACTCCCGACATGTTTAAAACAGCTTCTGATATGATAAGTAAAATGCCACCAGAGGATCTCCAGAAGATGTTTGAAATGGCTTCCTCAATGTCTGGGAAAGCATCTAGTTCATCATCTGCAGCTGTTGACGAGAATGTGAGAAATGCTTCTCAGTCAAATTTCCCCTCCTCGAATGCTAATGGAAGTAATGCTTTTGCCGAATCAAGTTCATCTCAGGATTCGTTGTTAAATATGAGAAATGCTGCTCAGTCAAACTTCCCGTCCTCAAGTACTGATTTGCAAGAACAAATGAGAAACCAGATGAAAGATCCAGCCATGCGACAGATGTTCACATCAATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGGGAACAATTTGGTTTCAAGCTTTCAAAAGAAGATGCAACGAAGGCTCAGCAAGCCATGTCATCCTTTTCACCAGAGGACTTGGATAGAATGATGCGATGGGCTGATAGGGTTCAGAGAGGAGTTGAAGGTGCAAAGAAGACAAAGAATTGGCTACTTGGAAAACCTGGTCTGATATTGGCAATAGTGATGCTCATTTTAGCAGCAATACTTCACCGGCTGGGTTTCATCGGTGGCTAG 1764 0.4172 MYNAMMDPEMIRIAQEQMSRMSPTEFAQIQQQMMSNPALMRMASESMKNMRPEDFKLAAEQLKHTRPEQMAEIGEKMANATPEEIAAMRARADAQMKYEISGAEMLKKQGNELHSQGRFHEAMQKYCLAKQNLREIPSSQSRKLLLACSLNLMSCYLKTGQYDECVKEGSEVLAYDAKNLKALYRRGQAYKELGLLKDAVSDLSMACEVCPDDDTVSKLLRETEEMLAEDGGEHAPRGLVIEEITEEDQNVQAQNSGSSSVEQTVAKPKTSNTSSKSSSTVINENSKSNMEGLNALKNDPEAIRSFQNFISNADPATLTSLNAGQSKDMSPDMIRTASNMISKMSPQELQNMLDMASSYQGENPFLRGSSNSTVNSGSIPPNVTPDMFKTASDMISKMPPEDLQKMFEMASSMSGKASSSSSAAVDENVRNASQSNFPSSNANGSNAFAESSSSQDSLLNMRNAAQSNFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPEMMANMGEQFGFKLSKEDATKAQQAMSSFSPEDLDRMMRWADRVQRGVEGAKKTKNWLLGKPGLILAIVMLILAAILHRLGFIGG 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00532 587 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 5 378 - -
Accr13g00532 587 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Accr13g00532 587 SUPERFAMILY TPR-like 101 226 IPR011990 GO:0005515
Accr13g00532 587 SMART tpr_5 146 179 IPR019734 GO:0005515
Accr13g00532 587 SMART tpr_5 103 136 IPR019734 GO:0005515
Accr13g00532 587 SMART tpr_5 180 213 IPR019734 GO:0005515
Accr13g00532 587 MobiDBLite consensus disorder prediction 248 287 - -
Accr13g00532 587 Gene3D Tetratricopeptide repeat domain 89 234 IPR011990 GO:0005515
Accr13g00532 587 MobiDBLite consensus disorder prediction 432 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00532 Accr-Chr13 5593298 5598953 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00532 100 229 Calmodulin-binding Proteins AT5G48570 33.088 6.52e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00532 - - gmx:100800315 848.195