Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00519 ATGGGTGTCCCAGGGAAGTGGATTAAAGCTTTGGTTGGTCTAAAGAAATCTGAAAAGGCAGAATCTTCGGATAAGGATGTTAATAGGACTGGAAAAATACGACACCGAAGGAAACAATCCATTGACATGGACAATGAAAAACTCCAAAATGAGTTTAATCATGATGCTACTCCTTTTGGAGATGCCAATATCCATTCAGTCACTGATGTCCAGTATTCACCTTCCACTTCACAACAAGTACAGGATGCCACATATAGCCATCAAATTGTGAGGGAGGAATGCGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCCGAAGAGCGCTACGAGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACGCGTTCGAGCAAGGCGTGTTCGCGTAGCATTGGAAAGTCAATCATCACAACAGAAACTTCAGCAACAACTTGCAAATGAAGCTCATGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAAAGACAGGAGGCTGCAGCTAAACGAGAGAGAGCAATGGCATATGCTCTGGCTCATCAGTGGCAGGCAGCATCAAGGCAGCAGGCTGGTTCTTCTGGATTTGAACCAGACAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGGCCTTGGGAGAACCGTTTTCTTGACATTAATACAAGGGATGGAGTAATGGTCAGTGAAAATGGAGCAGCGGAGAGTAAAAATGGAATCAGATCTCAATTAAGATCTGCTAGCAAGAAATCAGTTCTGCCAGATATTAGTCCAAACCTCACTAGTCAGATAACCGGGCCATCACTATCTGATGGTGGTGACTCTTCACCTAGTAAGTCTGCAGGTTTGCTGGAGGCATCAAAAACGCAGATTAAGATAAAATCTAATGCAAAAGTTGAAATGGAAGAAGCCAACTCAAGACCTGGGCCTGGTTCGAGATCTCATAGTAATCCGAAGGAGAGAATCACACAAGCTGATAAACAGGCCAAAAAACGATTATCTCTGCCTAACAGTGCAGGGGGAAGCGCTGGGGCTCAAACAACCAGAAATCCTGCCAGAACTAATGTGAAGGGAACAATCAGCACCCAAAAAGCCCTTCGTGACAAAGCTAAGCTCAATGGAAGAGGAGGGGATGTGAATTCAACAAAAACTGTTCCTCAACAGGAAGAAATGTAA 1305 0.4498 MGVPGKWIKALVGLKKSEKAESSDKDVNRTGKIRHRRKQSIDMDNEKLQNEFNHDATPFGDANIHSVTDVQYSPSTSQQVQDATYSHQIVREECAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRVALESQSSQQKLQQQLANEAHVREIEEGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQAGSSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVSENGAAESKNGIRSQLRSASKKSVLPDISPNLTSQITGPSLSDGGDSSPSKSAGLLEASKTQIKIKSNAKVEMEEANSRPGPGSRSHSNPKERITQADKQAKKRLSLPNSAGGSAGAQTTRNPARTNVKGTISTQKALRDKAKLNGRGGDVNSTKTVPQQEEM 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00519 434 MobiDBLite consensus disorder prediction 277 434 - -
Accr13g00519 434 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Accr13g00519 434 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Accr13g00519 434 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Accr13g00519 434 MobiDBLite consensus disorder prediction 18 45 - -
Accr13g00519 434 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Accr13g00519 434 MobiDBLite consensus disorder prediction 382 405 - -
Accr13g00519 434 Gene3D - 91 137 - -
Accr13g00519 434 MobiDBLite consensus disorder prediction 420 434 - -
Accr13g00519 434 SMART iq_5 91 113 IPR000048 GO:0005515
Accr13g00519 434 SMART iq_5 114 135 IPR000048 GO:0005515
Accr13g00519 434 MobiDBLite consensus disorder prediction 278 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00519 Accr-Chr13 5441128 5447394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00519 1 418 IQD Protein Family AT3G22190 58.392 3.99e-133 388