Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00509 ATGGCTTCCACGTACTTTCATGGCGGGAATTCTGAGATCCAACCTTCAGGGGATGGTTTACAGACACTTTACCTTATGAATCCAACCTACGTACCTTATTCTGACACTACCTCTCACCACCATCCCACAACCCCTAACATGCTTTTCTTCAATCCCAACACTTCCCCTTCTCCCCACGCGCCAAACCTCCCCCACGCGCCGCCTCCTCCTTCCCGGGCTCCCCACCACCACCTACTTGGTGTCATCCCAACCAACATGGTCGGATCCGAAAACTCCGACATCACTGCCTTCCACGGCTTTGCCTCCCCCGCCACCGCCACCACTTCTGCTGCGCCGCGGGTTCATAATTTGTGGGGTTCCATAATCCATCATCAACAAACACCATCATCGCCGGCGGCAGTACTGGCAGCAACCCCGCCCAGCAGTTCAGGTTTGACGGCTAGTGCTGGTTTCCGAAGGCCGAGTCAGCAAGGCTTGTCACTGAGCCTTTCGTCGCAGCAGACAGCTTTTAATAGGTCGCTTTCTGGTGAGCTCGATGTCCCGGGACAGGGACAATCCCGAGTTTCTGATATATCGCCGACGAGCCATGTCGGTGGTGGGGGTAATGATATGCAGATTCTGGGGAACTCTCCGACGTCGTCGTCGGTGTCGAACGGAATTCCGAGTGTGCAGAGCGCGATTTTGGGGTCTAAATATCTGAAGGCCGCGCAAGAGCTTCTGGATGAAGTTGTGAATGTGGGGAAGGGAATTGAGATAAGGGGTTCGATGGAGATTGAAGCGAGTATTGATAAAGAGAAGATGAAAATGAATAAATCATCAGAATCGGAATTTGGGAATATCGGTGGTGACGGTGGTTCAAGTGGCGGCAAGCAAGCATCTGAACTCAGCACCGCCCAAAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTTTCCATGCTTGAAGAGGTGGAACAAAGGTACAGGCAGTACAGGCACCAAATGCAGATATTGATATCTTCGTTTGAACAAGCAGCAGGATATGGTGCGGCCAAGTCATACACAGCACTTGCATTAGAGACAATATCGAAGCAATTTCGATGCCTTAAGGATGCAGTGTCTTGTCAGATCAAAGCAACCAGCAAGAGCCTCGGCGAAGACGATTACTTAGGAGCCAAGGTACAAGGTTCGAGGCTCCGGTATGTGGATCACCATCTCCGGCAACAGCGAGCTCTGCAGCAACTGGGAATGATACAGCACAATGCTTGGAGGCCCCAGAGGGGATTGCCTGAACGAGCTGTCTCTATTCTTCGTGCTTGGCTTTTTGAGCACTTCCTTCACCCTTATCCCAAGGACTCTGATAAAGTTATGCTTGCAAAACAAACTGGACTTACTCGAAGCCAGGTATCAAACTGGTTTATAAATGCTCGAGTTCGGCTGTGGAAACCAATGGTAGAAGAAATGTACTTGGAAGAAACCAAGGAGCAGAACAATGAGTCCAACCCAAAGGACAACAACACCAATAGATCATCAAAAGAATCAAACAAGGACCCAAATAATAATGAAGCTCACGAGGAATCAGGTTCCTTTAACATTAGATCATCATTTGAAGCTCTCCAATCAAAAACAGATCATCATCAAACATCATTCAACAACCAAACCACCATCACTAATTCCCTACACGACCTCTCAAATCATCCTAATGATCCAATGGGTGTCACTAACGTTTCAATGGACGTGGAAATGAAACCCCGGTTTGTTAAAGACGGGTATGACAACCCGTTATTAAGTGAAGAGGGTTACGGAGGATTAATCTCAATGCAAGACCTTGGAAGGTTTAACGTTAGTAATGTTTCTGAACAGCATTTAGCTCCGAGGTTTCATGGGAATGGTGTTTCCCTCACTTTGGGACTCCCTCATCAGACTGACAACCTGTCTCTCTCTGCAACTCAACATCATGGCTTTCTCTCCCACAACATACATTTGGGAACCAATGATGCCACTGAGCTTTGTGCCATCAATGCTGCTGCGGCAGCTGCCGCCACCGCTCCTCCGCCATCTTCTCATTCAGGCGCGGCCACCAGCTATGAGAATATTGATATTCAGAACAGAAAGAGCTTCGCAGCTCAGTTGTTGCCGGATTTCGTCACCTGA 2133 0.4885 MASTYFHGGNSEIQPSGDGLQTLYLMNPTYVPYSDTTSHHHPTTPNMLFFNPNTSPSPHAPNLPHAPPPPSRAPHHHLLGVIPTNMVGSENSDITAFHGFASPATATTSAAPRVHNLWGSIIHHQQTPSSPAAVLAATPPSSSGLTASAGFRRPSQQGLSLSLSSQQTAFNRSLSGELDVPGQGQSRVSDISPTSHVGGGGNDMQILGNSPTSSSVSNGIPSVQSAILGSKYLKAAQELLDEVVNVGKGIEIRGSMEIEASIDKEKMKMNKSSESEFGNIGGDGGSSGGKQASELSTAQRQELQMKKSKLVSMLEEVEQRYRQYRHQMQILISSFEQAAGYGAAKSYTALALETISKQFRCLKDAVSCQIKATSKSLGEDDYLGAKVQGSRLRYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKEQNNESNPKDNNTNRSSKESNKDPNNNEAHEESGSFNIRSSFEALQSKTDHHQTSFNNQTTITNSLHDLSNHPNDPMGVTNVSMDVEMKPRFVKDGYDNPLLSEEGYGGLISMQDLGRFNVSNVSEQHLAPRFHGNGVSLTLGLPHQTDNLSLSATQHHGFLSHNIHLGTNDATELCAINAAAAAAATAPPPSSHSGAATSYENIDIQNRKSFAAQLLPDFVT 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00509 710 MobiDBLite consensus disorder prediction 278 299 - -
Accr13g00509 710 Pfam Associated with HOX 227 367 IPR006563 -
Accr13g00509 710 Gene3D - 419 499 - -
Accr13g00509 710 MobiDBLite consensus disorder prediction 130 151 - -
Accr13g00509 710 Pfam Homeobox KN domain 433 472 IPR008422 GO:0003677|GO:0006355
Accr13g00509 710 SMART prehox3 221 368 IPR006563 -
Accr13g00509 710 MobiDBLite consensus disorder prediction 485 522 - -
Accr13g00509 710 MobiDBLite consensus disorder prediction 36 56 - -
Accr13g00509 710 MobiDBLite consensus disorder prediction 502 516 - -
Accr13g00509 710 MobiDBLite consensus disorder prediction 177 199 - -
Accr13g00509 710 SUPERFAMILY Homeodomain-like 417 482 IPR009057 -
Accr13g00509 710 SMART HOX_1 416 480 IPR001356 GO:0003677
Accr13g00509 710 Coils Coil 300 334 - -
Accr13g00509 710 ProSiteProfiles 'Homeobox' domain profile. 413 476 IPR001356 GO:0003677
Accr13g00509 710 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 130 503 - -
Accr13g00509 710 FunFam BEL1-like homeodomain protein 9 419 481 - -
Accr13g00509 710 CDD homeodomain 416 477 IPR001356 GO:0003677
Accr13g00509 710 MobiDBLite consensus disorder prediction 36 77 - -
Accr13g00509 710 MobiDBLite consensus disorder prediction 57 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00509 Accr-Chr13 5292862 5296559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00509 3 709 Homeobox Transcription Factor Family AT2G35940 41.969 2.29e-131 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr13g00509 POX 7.2e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00509 - - pcin:129313430 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03313 1 69660433 69663453 Accr13g00509 13 5292862 5296559 CCT