Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00508 ATGGGTTTATTGTTGAAAGAAGCCTTGAAGACTCTGTGCGGTCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGCTGCCACAATCCTAAGCTGTTAATATGGGAAGAATGCTATTATGAACCCTTGCCTTGCCCCTTTCCTCAAAACATTGATAGAAATGGGACATCTAACTTGTCCTTCAGAGGTGTGGAAGGCGACCGAGTATGTTCTCTGATTAACAGAATGGTGGTGAATAATTCAGTCAATATTGCTGGAGAAGGGATAATTGGACGGGCAGCATTCACGGGAAACCATCAGTGGATTCTCTTGAACAATTTTACTAGAGCTGCATATCCCCCTGAGGTATACAATGAAGTGCATCATCAATTTTTGGCTGGAATGCAGACCATAGTGATTATTCCTGTGCTTCCTCATGGGGTTATTCAACTTGGTTCTTTTTTGGCAATGATGGAGGATGTTCGATTTGTGAATGATGTAAGGAGTTTAATCTTGCAATTGGGATGTGTTCCTGGTGTTCTTCTATCTGAAGATTATTCAACAAAAGTTTCTGCCGAAGGTCTTGGTGCAACTGTTAATGGTGGGGTGCCTATGTCAGTAGATCCGCCTGTTGTTTCCTCAAATTGCAGCCCCTCTGCAACTAGTGGCTCCAACCAACAAAGCAATTCACCTCACACTTCAAACTCCTTTGTTCACCAATCTCTACCACACATGGAAGAGATAAATAATGACCAAGTTTCTGTATTGAAACATCGAACCCCTAATCTGGCTCAGACGTTGTCCAAGTACCATGATAATCTCTGCCAACCTAAGGCAATTCCATTAACAAAACCAAACTTTACTTGCTCTTCAGATAATAGAGTTGTGGAGGCACAAGTGATACCCTCAAATCTTAAATTGTGTCCCCAACAACCTTCTGTTTTTTGTGATTCAAGATCTGCATTCATTGAGTTGAATGGGGTTGGCCAATCAAGTCTGAGTGACTGTGGTATGAAGTTTAATGAACAACTAACTTCATCAGGTAGTGGGAGCCAGAATTACGTCAATTCTCTCATAAATGCGCCAAGCGGAAGCCATATGCCTGACTACTGTCAAAATTCTGTTAATACTCCATTACTTGGAGGAATCCCGATTCATGGTGGAATGAGTAGCCTGCCGAGGTCAAGCTTGATTAATACCTCTGTTTCAGAACCTCCCAAAGTTGGTGTTGCTGATTTTGCTGAAACACATAAACTCGCGACTGGACTTCAAAATGATGATTCAACTAAGATGGGGGCTTTTTCTCTCCCTTATGTGGCAAAACAATTAGATGCTTCTCACAGGCCTCTAGAAAGCTCTGATCAGAAGAATCTTCCCCTTGATTTAAAGTGTACACATGACAAGTTGGGTCCAAATGATCAGATGATAGGTGGTCATTTGCTTCAGGCCCTTAAGATTCCATCTCTTCATCCTGAGGAGCATGTGCCTGTGTGTGATCAAATTCTGGGTTTCGACATTGGTTCCCTCAATAATGATGTTACAAGTCAATCTTTCACAAAACAAGAAGCTTATGCTCAATCTTCATCAGGAGATGACCTGTTTGATGTTTTAGGTGTGGATTTTAAAAACAAAATACTGAGTGAAAACTGGAATAAGTTGCTTTTTGACGAATCAGATGTCAATCTGCGAGTCCCGGATAAAAAGGCAGCATGTATGAATATGCAGAGCTTAGATGCTGATTGCTATTCAGTTAATGAAACAGTATCTGATAATGGCATTTTCTCCGGGAGGGGCACTGATCATCTTTTGGATGCTGTGGTCTCCCAAGTTCAATCTGCTGTGAAACAGGATTCTGATGATATGTCTTGCAGGACAACAGTGACTAGGATCAGCAGTGCCTCTGTACCCTCTTCTTCCTACCGGCAGGTTATGTCTGATCATGCCCTTGGTGCAATGTTGAACTTTCCCAAGACTGAGGGTAAAGTAAGTGCTGCAGAAACTTGTTCTCTTCAGTCTGGACGTCACAAGGATGATGCTGGAAACTGTTCTCAAACTACTTCCATATATGGGTCTCAACTCAGTTCATGGGTTGAGAATGTTAGCAATGTGAAGCGTGAAAACAGTGTTTCAACTGGTTACTCTAAGCGACCAGATGAAGTTGGCAAATCAAACCGCAAAAGGCTTAAACCTGGAGAGAACCCAAGACCTCGACCTAAGGATCGCCAAATGATTCAAGACCGTGTGAAAGAGTTGCGAGAAATTGTGCCAAATAGCGCTAAATGTAGCATTGATGCGCTTCTTGAGCGGACGATAAAGCACATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAAACAGGGGATTCCAAGATCATTAATAGGGAAGATGGGCTGCTTCTGAAAGATAATTTTGAAGGAGGGGCTACATGGGCATACGAGGTTGGCTCACAATCAATGGTTTGCCCCATCATAGTTGAGGATCTTAATCCACCTCGTCAGATGTTAGTGGAGATGCTTTGTGAAGAACGTGGTTTCTTTCTGGAGATAGCTGACTTGATCAGGGGAATGGGTTTGACCATTTTAAAGGGGGTAATGGAAGCTCAAAATGACAAGATCTGGGCACGTTTTGCTGTGGAGGCAAATCGGGACGTGACAAGGATGGAAATATTTATGTCACTGGTTCATCTTCTGGAACAAACAGCAAAGGGTGGTGGTGCATCTACATCGAATGAAATCAACAACATGATGGTTTATCAGTCCTTCCCACAAACTGCTCAGATACCAGCAACTGGGAGACCTAGTAGTTTGCAATGA 2808 0.4266 MGLLLKEALKTLCGRNQWSYAVFWKIGCHNPKLLIWEECYYEPLPCPFPQNIDRNGTSNLSFRGVEGDRVCSLINRMVVNNSVNIAGEGIIGRAAFTGNHQWILLNNFTRAAYPPEVYNEVHHQFLAGMQTIVIIPVLPHGVIQLGSFLAMMEDVRFVNDVRSLILQLGCVPGVLLSEDYSTKVSAEGLGATVNGGVPMSVDPPVVSSNCSPSATSGSNQQSNSPHTSNSFVHQSLPHMEEINNDQVSVLKHRTPNLAQTLSKYHDNLCQPKAIPLTKPNFTCSSDNRVVEAQVIPSNLKLCPQQPSVFCDSRSAFIELNGVGQSSLSDCGMKFNEQLTSSGSGSQNYVNSLINAPSGSHMPDYCQNSVNTPLLGGIPIHGGMSSLPRSSLINTSVSEPPKVGVADFAETHKLATGLQNDDSTKMGAFSLPYVAKQLDASHRPLESSDQKNLPLDLKCTHDKLGPNDQMIGGHLLQALKIPSLHPEEHVPVCDQILGFDIGSLNNDVTSQSFTKQEAYAQSSSGDDLFDVLGVDFKNKILSENWNKLLFDESDVNLRVPDKKAACMNMQSLDADCYSVNETVSDNGIFSGRGTDHLLDAVVSQVQSAVKQDSDDMSCRTTVTRISSASVPSSSYRQVMSDHALGAMLNFPKTEGKVSAAETCSLQSGRHKDDAGNCSQTTSIYGSQLSSWVENVSNVKRENSVSTGYSKRPDEVGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNSAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIINREDGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGMGLTILKGVMEAQNDKIWARFAVEANRDVTRMEIFMSLVHLLEQTAKGGGASTSNEINNMMVYQSFPQTAQIPATGRPSSLQ 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00508 935 MobiDBLite consensus disorder prediction 200 231 - -
Accr13g00508 935 MobiDBLite consensus disorder prediction 699 737 - -
Accr13g00508 935 MobiDBLite consensus disorder prediction 712 737 - -
Accr13g00508 935 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 929 IPR043561 GO:0003700|GO:0006355
Accr13g00508 935 MobiDBLite consensus disorder prediction 204 231 - -
Accr13g00508 935 CDD bHLH_AtLHW_like 726 795 - -
Accr13g00508 935 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 164 IPR025610 -
Accr13g00508 935 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 722 771 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00508 Accr-Chr13 5219971 5225504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00508 520 929 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.807 2.12e-119 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00508 - - gmx:100812899 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03314 1 69710343 69715502 Accr13g00508 13 5219971 5225504 CCT