Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00496 ATGTCTTCCCACAAGAGAACTCTTCTCAGAATACTGCTCACTGTGAATGGAAGCTGTTGCTGTGGCAGGCCCAAGCCCACCGACGTCTTCGAGCCCAAGCCCAAGCACCAGATGATGCCAAACCCAATCGGTAGCCGGACATCTTCAACAGCCACCTCCGACGGCCGAAATTACGCCCATTCCGAGGAAGACGACAACGACGGAGTTTTCACCCCCACCACGGTGTCGGAAGCGGAGACGGAGAGTCAGAGGAACTTGTTGCCGAAGCGGAGTCCGATAGTGGACAGCGTCGCGGTGGAGAAGGAGTCCGAGGATCCGTACAAGGATTTCAGGCACTCGATGCTGCAGATGATATTTGAGAAGGAGATGTCCTCGGAATCTGATCTGAAGGAGCTTCTGGAAGCATTCCTGCAGCTGAACTCGCCGAGACAGCACGACGTGATCCTGAAGGCCTTCTCGGAAATCTGCGGAGACGCGTTTCCACATGATCATGACAAGAAGACGACGAGCAAGAACAAGAGCAAGCAAGGGATGACTTGTTATGGTCAGGTGAGGAGTCAGCCATTGGCACGTGCGTAA 579 0.544 MSSHKRTLLRILLTVNGSCCCGRPKPTDVFEPKPKHQMMPNPIGSRTSSTATSDGRNYAHSEEDDNDGVFTPTTVSEAETESQRNLLPKRSPIVDSVAVEKESEDPYKDFRHSMLQMIFEKEMSSESDLKELLEAFLQLNSPRQHDVILKAFSEICGDAFPHDHDKKTTSKNKSKQGMTCYGQVRSQPLARA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00496 192 MobiDBLite consensus disorder prediction 41 56 - -
Accr13g00496 192 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 67 159 IPR038933 GO:0045892
Accr13g00496 192 NCBIfam uncharacterized plant-specific domain TIGR01568 97 156 IPR006458 -
Accr13g00496 192 Pfam Transcriptional repressor, ovate 103 156 IPR006458 -
Accr13g00496 192 MobiDBLite consensus disorder prediction 160 192 - -
Accr13g00496 192 MobiDBLite consensus disorder prediction 24 89 - -
Accr13g00496 192 ProSiteProfiles OVATE domain profile. 99 158 IPR006458 -
Accr13g00496 192 MobiDBLite consensus disorder prediction 68 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00496 Accr-Chr13 5051306 5051884 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Accr13g00496 Ovate 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00496 - - pcin:129314681 256.144