Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00450 ATGGCGAGTCACAGACTAGGACAGACTGGTTTGTCTGAATCATCGCCTTCAGGTCATCACTATGGAGTACTTCACGGAATCAATAATAATACTCCTGCATCAGCAGCAGCATCCACCTTAATCAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTGCAAGGAGTAGAGATTAGAAATGATGAAGGCAGAGCACCTTTTTTCACATCCAGGCCTGCAGCTACTACTCTGGAAATGTTCCCCTCTTGGCCAATCAGATTTCAACAAACCCATACAGTAGTAGGAGGATCAAAGTCAGGAGGTGAAAGCACTGATTCAGGATCTGGTGTTAACACCATATCAAGCAAAAGTGAACCTCACTTTGAATTTGAACCAGAATCTCCTATTAGTAATAAGAAAGCTTCTGCTTCTTCTTCAGAACTTCATCATCAGAAGCAAGTGATGGCAAGTGGTGGTGCCTTAAGAACAGGCCCATCACAGAATCAATCACCTGCCAAATCACCTCAGGAAAAGAGGAAAGGGGATGGTTCTTCATCATCAGAAAAACAACTTGATGCAAAGACACTGAGACGTCTAGCTCAAAACAGAGAGGCTGCTCGAAAGAGCCGCCTGAGGAAAAAGGCTTACGTGCAGCAGTTAGAATCGAGTAGGATAAAGCTTACACAGCTTGAACAAGACCTTCAAAGAGCACGCTCTCAGGGACTCTTCTTAGGCTGTGCTGGTGCCGGTGGCAACATAAGCTCTGGAGCTGCAATATTTGACATGGAATATGCAAGATGGTTAGAGGAAGACCACCGGCACATGACGGAGTTAAGGGCGGCGCTACAAGCGGGGTTATCCGACGGCGAGTTAAGAATAATGGTGGACGGATATCTGTCACATTACGATGAGATATTCAGGCTCAAAGGAATCGCTGCAAAAACAGACGTGTTTCATCTCATTACGGGCATGTGGACTTCTTCTGCTGAACGTTGCTTCCTTTGGATGGGTGGTTTCAGACCCTCTGAACTCATCACGATGTTGATACAGCAATTAGAGCCACTGGCTGAGCAGCAGATTATGGGAATGTATGGTCTCAGGCATTCCTCACAGCAAGCAGAAGAGGCTCTCTCTCAAGGCCATGAGCAACTCCAACAGTCTCTCGTAGATACCATCGCTGGCGGCCCCATCGGTGATGGCGTGCAACAGATGGTCATCGCCATGAGCAAGCTCTCCAATCTTGAAGGATTCGTCCGACAGGCGGATAACTTGAGGCAACAGACACTGCACCAGTTATGTAGATTGCTGACAATAAGGCAAGCAGCAAGATGCTTCCTTGTAATGGCTGAGTATTATGCTCGTCTTCGTGCCCTTAGTTCTCTTTGGGCTTCCAGACCTCGAGAGACGATGATGAACGACGAGAACTCGTGCCAAACGACAACGACGGAATTTCAAATGGTGCAACCACCTCCTCCTCCTCATCATCATCATCAGAATCATTTTGCTGGTTTCTGA 1509 0.4698 MASHRLGQTGLSESSPSGHHYGVLHGINNNTPASAAASTLINQGSAFDFGELEEAIVLQGVEIRNDEGRAPFFTSRPAATTLEMFPSWPIRFQQTHTVVGGSKSGGESTDSGSGVNTISSKSEPHFEFEPESPISNKKASASSSELHHQKQVMASGGALRTGPSQNQSPAKSPQEKRKGDGSSSSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGCAGAGGNISSGAAIFDMEYARWLEEDHRHMTELRAALQAGLSDGELRIMVDGYLSHYDEIFRLKGIAAKTDVFHLITGMWTSSAERCFLWMGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGHEQLQQSLVDTIAGGPIGDGVQQMVIAMSKLSNLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVMAEYYARLRALSSLWASRPRETMMNDENSCQTTTTEFQMVQPPPPPHHHHQNHFAGF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00450 502 MobiDBLite consensus disorder prediction 158 172 - -
Accr13g00450 502 PANTHER TRANSCRIPTION FACTOR TGA9 142 466 - -
Accr13g00450 502 MobiDBLite consensus disorder prediction 482 502 - -
Accr13g00450 502 Gene3D - 191 240 - -
Accr13g00450 502 FunFam BZIP family transcription factor 191 240 - -
Accr13g00450 502 SUPERFAMILY Leucine zipper domain 192 235 IPR046347 GO:0003700|GO:0006355
Accr13g00450 502 MobiDBLite consensus disorder prediction 135 150 - -
Accr13g00450 502 MobiDBLite consensus disorder prediction 173 194 - -
Accr13g00450 502 CDD bZIP_HBP1b-like 192 243 - -
Accr13g00450 502 Coils Coil 211 238 - -
Accr13g00450 502 MobiDBLite consensus disorder prediction 1 16 - -
Accr13g00450 502 MobiDBLite consensus disorder prediction 98 194 - -
Accr13g00450 502 Pfam Seed dormancy control 272 347 IPR025422 GO:0006351|GO:0043565
Accr13g00450 502 Pfam bZIP transcription factor 191 233 IPR004827 GO:0003700|GO:0006355
Accr13g00450 502 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Accr13g00450 502 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 234 IPR004827 GO:0003700|GO:0006355
Accr13g00450 502 ProSiteProfiles DOG1 domain profile. 255 463 IPR025422 GO:0006351|GO:0043565
Accr13g00450 502 MobiDBLite consensus disorder prediction 1 25 - -
Accr13g00450 502 MobiDBLite consensus disorder prediction 98 123 - -
Accr13g00450 502 SMART brlzneu 188 253 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00450 Accr-Chr13 4582697 4589271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00450 147 502 bZIP Transcription Factor Family AT1G08320 67.227 1.43e-175 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr13g00450 DOG1 4.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00450 K14431 - gmx:100775461 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03354 1 69973802 69979585 Accr13g00450 13 4582697 4589271 CCT