Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00440 ATGGCGGAAGAACATAGATGCCAGGCTCAGCGCCTCTGTGCTAACAACTGCGGCTTCTTCGGCAGTCCTGCCACGCAGGATCTTTGTTCCAAATGCTACAGAGATTTGCAGCTTAAGGAGCAACAATCCTCGTCTGCCAACCTGGTTCTCAATCAAACCCTGGTCCCTCCGCCGTCCGCCGCGCAGAAATCGGAATCATCTTCATCGTTGCTGGAACCGGCTGCCGATCTTTCGGCTCCGGTTGCTGTTGCGGTTGATCCGGTGGTTCAGGCGGAGGAGCTGAAGAGCGCGTCGGCGGCTCAGCCGAATAGGTGCATGACGTGCAGCCGGCGCGTGGGGCTCACGGGGTTCAGGTGTCGGTGCGGGTCGACGTACTGCGGGGCTCACCGCTACCCGGAGCAGCACGGCTGTGAGTTCGACTTCAAGACGATGGGGCGGGAGCAGATCGCCAAGGCCAATCCAATAGTGAAGGCCGACAAACTGGACAAGATCTGA 495 0.5939 MAEEHRCQAQRLCANNCGFFGSPATQDLCSKCYRDLQLKEQQSSSANLVLNQTLVPPPSAAQKSESSSSLLEPAADLSAPVAVAVDPVVQAEELKSASAAQPNRCMTCSRRVGLTGFRCRCGSTYCGAHRYPEQHGCEFDFKTMGREQIAKANPIVKADKLDKI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00440 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Accr13g00440 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 55 - -
Accr13g00440 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 10 164 - -
Accr13g00440 164 Gene3D - 81 160 IPR035896 -
Accr13g00440 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Accr13g00440 164 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Accr13g00440 164 FunFam Zinc finger AN1-type containing 6 80 160 - -
Accr13g00440 164 Gene3D - 1 75 - -
Accr13g00440 164 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Accr13g00440 164 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Accr13g00440 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
Accr13g00440 164 SUPERFAMILY AN1-like Zinc finger 96 159 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00440 Accr-Chr13 4489001 4489495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00440 1 164 C2H2 Transcription Factor Family AT3G52800 51.445 1.10e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00440 - - pcin:129295477 222.246