Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00439 ATGGGGTTCCTTCAAGTCTTCATCAGGATCACTCTTTTCCTGTTTATTGGATTCACTTTAGTTCATGGAGTCACTTCTAAGCAAAAGCATTATATAGTATACATGGGAGAGCATTCACATCCCAATTCTGAATCTGTGGTCAGAGCAAACCATGAGATTCTTGCTTCAGTCTCTGCAAGTTTGGACGAAGCAAAAGCAGCAGCAGTTCATCACTACGCGAAAAACTTTCAGGGTTTCTCAGCCATGCTCACGCCAGAGCAAGCTGATCAACTTGCAGAACATGATTCAGTAGTGTCAGTGTTTGAGAGCAAAATGAATCGGCTCCATACTACACGTTCATGGGATTTTCTTGGATTGGACTCTGTCTACAATGGCGATTATCTACCCATGGACTCCACATCCAATGTCATTGTTGGTGTTGTTGACTCAGGGATATGGCCTGAATCGAAAAGCTTCAGTGATGAAGGATTAGGTCCTGTGCCAGAAAAATTCAAGGGAGAGTGTGTCATTGGTGAAAACTTCACAAAAGCCCATTGTAACAAGAAAATAATTGGTGCACGGTTCTATTCCAAAGGTTTCATTACTGATTTTGGTCCACTGGAATCTCAGAACAGAACTTTCTTCATGTCAGCTCGAGATAGCGATGGACATGGGACCCACACAGCTTCCACAATTGCAGGATCCATTGTCAGTGACGTTAGCTTACTTGGAATGGCTAAAGGAACTGTCAGAGGAGGAGCTCCAGGAGCCAGACTTGCCATCTACAAGGCTTGCTGGTTTAATAGGTGCAGTGATGCTGATGTTCTTTCTGCCATGGATGATGCTATTCATGATGGTGTTGATATCTTGTCGCTTTCCCTCGGACCGAAGCTGCCCCTGCGAATTTATTTCGAGGATGCGGTATCTATAGGAGCATTCCATGCGTTTAGAAGGAACGTTCTCATTTCTGCTTCTGTAGGGAACTCAATTTTTCCAGGTACAGCTTACAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCACAATAGATAGGGAATTCCATTCAAATATCTTACTTGGCAACTCAACAGTTTTGAAGGGTTTCTCTTTGAATCCAATTAAAATGAAGAAGTCTTGTGGCTTGATAGATGGGAAAAATGCTGCAGCACCTGGCATTCCATCAAGAAATGCAAGCTTCTGCAAAGACAACACTCTAGATCCTGCCCTGATCAAGGGGAAAATTGTGGTTTGTACAATTGAGACTGTGGCTGATGATCGACCAGCAAAGGCTACGGTTATAAAGCAAGGTGGGGGTGTTGGAATGATACTTATTGATCACAATGCTAAAGATGTTGGCTTTCAGTTTGTCATCCCAAGCACTATTATTGGTGAGGGAGCTGTACAAGAGCTACAGGCATACATGGACACGGACAAGAACCCAGGTGCTAGGTTCTTGTCAACAATTACAAATGTAGATGTTAAACCTGCACCTGAAGTTGCGGCGTTTTCTTCTGCGGGACCAAATATAATTACGCCTGACATTATAAAGCCTGACATCACAGGCCCTGGAGTGAATATTTTAGCGGCATGGTCTCCATTGGCAACTAAAGACACAACAGAACACCGATCTGTTGACTATAACATTATCTCTGGAACATCCATGTCTTGTCCCCACATTACTGCAGTTGCTGCAATCTTGAAGTCTCATCAACCCTCATGGGGTCCAGCAGCCATAATGTCTGCAATAATCACAACCGCAACAACCATGGACAACACACGCGGCCAAATTGGAAGAGATCCAAATGGAACTCTAGCCACACCATTTGATTATGGATCAGGCCATATTAACCCAGTCGCAGCACTAAACGCAAGACTAGTATACGATTTTGATTCCCATGATGTTCTGAATTTTCTGTGCAGTGCTGGTGCAAGTTCAGCTCGGCTTAAGAACCTCACTGGGGAACTACTTGTGTGTCAGAAATCTCCTCCTGCGTCGTACAACTTGAATTATCCTTCAATTGGGGTATCAAACTTGAATGGAAGTTTGTCGGTTTATCGGACAGTTACTTACTATGGTATGGAACCAACAGTATATGTAGCAGGTGTTGAGGAACCAGCTGGTTTGAAAGTTAAGGTTACACCTTCAGAAATTGAGTTTAGGAAAACAGGGGAGAAAGTAACTTTCAGGGTTGATTTCAGTCCTTACAAGAGTAGCAATGGGAATTTCGTGTTTGGGGCCTTGATATGGAAAAATGGGATGCATAGTGTTAGAAGCCCTGTTGCTCTCAATGTGTTGGCTGTTTAG 2286 0.4357 MGFLQVFIRITLFLFIGFTLVHGVTSKQKHYIVYMGEHSHPNSESVVRANHEILASVSASLDEAKAAAVHHYAKNFQGFSAMLTPEQADQLAEHDSVVSVFESKMNRLHTTRSWDFLGLDSVYNGDYLPMDSTSNVIVGVVDSGIWPESKSFSDEGLGPVPEKFKGECVIGENFTKAHCNKKIIGARFYSKGFITDFGPLESQNRTFFMSARDSDGHGTHTASTIAGSIVSDVSLLGMAKGTVRGGAPGARLAIYKACWFNRCSDADVLSAMDDAIHDGVDILSLSLGPKLPLRIYFEDAVSIGAFHAFRRNVLISASVGNSIFPGTAYNVAPWILTVAASTIDREFHSNILLGNSTVLKGFSLNPIKMKKSCGLIDGKNAAAPGIPSRNASFCKDNTLDPALIKGKIVVCTIETVADDRPAKATVIKQGGGVGMILIDHNAKDVGFQFVIPSTIIGEGAVQELQAYMDTDKNPGARFLSTITNVDVKPAPEVAAFSSAGPNIITPDIIKPDITGPGVNILAAWSPLATKDTTEHRSVDYNIISGTSMSCPHITAVAAILKSHQPSWGPAAIMSAIITTATTMDNTRGQIGRDPNGTLATPFDYGSGHINPVAALNARLVYDFDSHDVLNFLCSAGASSARLKNLTGELLVCQKSPPASYNLNYPSIGVSNLNGSLSVYRTVTYYGMEPTVYVAGVEEPAGLKVKVTPSEIEFRKTGEKVTFRVDFSPYKSSNGNFVFGALIWKNGMHSVRSPVALNVLAV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00439 761 FunFam Subtilisin-like protease SBT5.3 20 109 - -
Accr13g00439 761 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Accr13g00439 761 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Accr13g00439 761 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Accr13g00439 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 109 IPR037045 -
Accr13g00439 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Accr13g00439 761 Pfam Subtilase family 134 583 IPR000209 GO:0006508|GO:0008236
Accr13g00439 761 ProSiteProfiles Serine proteases, subtilase domain profile. 113 615 - -
Accr13g00439 761 CDD PA_subtilisin_like 350 477 - -
Accr13g00439 761 Gene3D - 344 485 - -
Accr13g00439 761 SUPERFAMILY Subtilisin-like 5 644 IPR036852 GO:0004252|GO:0006508
Accr13g00439 761 Gene3D Peptidase S8/S53 domain 135 627 IPR036852 GO:0004252|GO:0006508
Accr13g00439 761 FunFam Subtilisin-like protease SBT1.5 135 357 - -
Accr13g00439 761 Pfam Peptidase inhibitor I9 30 109 IPR010259 -
Accr13g00439 761 Gene3D - 632 759 - -
Accr13g00439 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 755 IPR045051 -
Accr13g00439 761 CDD Peptidases_S8_3 108 581 IPR034197 -
Accr13g00439 761 Pfam Fibronectin type-III domain 661 755 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00439 Accr-Chr13 4472854 4476990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00439 31 758 Subtilisin-like Serine Gene Family AT2G04160 42.368 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00439 - - gmx:100792672 1139.41