Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00433 ATGGCGCCGAGTATAAAAAATATACAGCTAACCTCCCTCGCGACTGCCGCCACCAATGGCTTGGAAGAAGTGCGGCTTTTGGATTTCTACGAAGATAGGAACTACGATGGTTCTGTTGGAATTGAAGAAGGGCTTAATCGAATTCATGTCGGAGTCACTGGCATGATCTGCGCTGCTTGCTCCAATTATGTCGAAGTAGCTCTGAATGCTGTCGATGACGTCATCAGCGCCTCCGTGGCTCTGCTTCAGAACAAGGCTGACGTGGTTTACAAGCCTTCTTTGGTTAAGGATGTACATATTAAAAATGAGATTGAAGATGCAGGGTTTGAAGCAGAGATATTACCTGAACCCAGTGTTGATTCACTTAGGAAGAAGTCGCATGGAACCTTGGTGGGATAG 399 0.4637 MAPSIKNIQLTSLATAATNGLEEVRLLDFYEDRNYDGSVGIEEGLNRIHVGVTGMICAACSNYVEVALNAVDDVISASVALLQNKADVVYKPSLVKDVHIKNEIEDAGFEAEILPEPSVDSLRKKSHGTLVG 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00433 132 CDD HMA 52 112 IPR006121 GO:0046872
Accr13g00433 132 ProSiteProfiles Heavy-metal-associated domain profile. 46 112 IPR006121 GO:0046872
Accr13g00433 132 SUPERFAMILY HMA, heavy metal-associated domain 42 117 IPR036163 GO:0046872
Accr13g00433 132 ProSitePatterns Heavy-metal-associated domain. 52 82 IPR017969 GO:0046872
Accr13g00433 132 Gene3D - 45 116 - -
Accr13g00433 132 Pfam Heavy-metal-associated domain 52 110 IPR006121 GO:0046872
Accr13g00433 132 PRINTS Copper-transporting ATPase 1 signature 73 96 - -
Accr13g00433 132 PRINTS Copper-transporting ATPase 1 signature 102 122 - -
Accr13g00433 132 PRINTS Copper-transporting ATPase 1 signature 47 72 - -
Accr13g00433 132 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 41 121 - -
Accr13g00433 132 FunFam Copper-exporting P-type ATPase A 44 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00433 Accr-Chr13 4396020 4396418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00433 1 132 Primary Pumps ATPases AT5G44790 52.113 3.59e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00433 K17686 - cpap:110817374 146.747