Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00429 ATGAGGATGCTTTACAATTCCGGAGGTTACCTTGTTAATTTACGATTTTGCCACTGTCCTCAATTCCTCTCCTCTAACGCACCATTGCTTATTCCTTCTTCACGATCACGGATTACTTGCCTCTCTCTCAGAAATTCCATTTCTGCAATTTCCTACAGACATATTCTCTTTTCTCCTTCTGAGTCGTCGTCGATTCGAGCATCGATGACGTCTTCTACCTCATTCATTGGCTCAGAGGATACGAAGCCATTTTCTGTGCTCTTTGTTTGCCTCGGCAACATCTGTAGGAGTCCAGCTGCTGAAGGGGTCTTCAGACACTTGGTCAACAAAAGGGCTCTAGATTCCAAGTTCAAAATTGATTCTGCTGGCACCATTAATTACCATGAGGGGAATGAAGCAGACCCAAGGATGAGAGCGGCCTCAAAAAGGCGAGGAATCGAGATAACCTCTATTTCTAGGCCAATCCAACCATCTGATTTCCGAGATTTTGATCTTATTCTTGCTATGGACAAGCAAAACAGAGAGGACATATTAGAGGCATTCAATAGATGGAAGTCTAGAGATACTTTGCCCGCTGATGCATATAAGAAGGTTAAATTGATGTGCTCATATTGCAAAAAACATGATGAATCTGAAGTCCCTGATCCTTACTATGGCGGACCACAGGGGTTTGAGAAGGTGTTAGATTTGCTAGAAGATGCTTGTGAATCATTGTTGGACGAAGTTTTGGCAGAGCATAAGCATTTACAAGAATGA 756 0.4272 MRMLYNSGGYLVNLRFCHCPQFLSSNAPLLIPSSRSRITCLSLRNSISAISYRHILFSPSESSSIRASMTSSTSFIGSEDTKPFSVLFVCLGNICRSPAAEGVFRHLVNKRALDSKFKIDSAGTINYHEGNEADPRMRAASKRRGIEITSISRPIQPSDFRDFDLILAMDKQNREDILEAFNRWKSRDTLPADAYKKVKLMCSYCKKHDESEVPDPYYGGPQGFEKVLDLLEDACESLLDEVLAEHKHLQE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00429 251 CDD LMWPTP 85 240 - -
Accr13g00429 251 Gene3D - 67 247 - -
Accr13g00429 251 PRINTS LMW phosphotyrosine protein phosphatase signature 213 228 IPR017867 GO:0004725|GO:0006470
Accr13g00429 251 PRINTS LMW phosphotyrosine protein phosphatase signature 86 103 IPR017867 GO:0004725|GO:0006470
Accr13g00429 251 PRINTS LMW phosphotyrosine protein phosphatase signature 129 145 IPR017867 GO:0004725|GO:0006470
Accr13g00429 251 FunFam Low molecular weight protein-tyrosine-phosphatase 83 247 - -
Accr13g00429 251 Coils Coil 239 251 - -
Accr13g00429 251 Pfam Low molecular weight phosphotyrosine protein phosphatase 86 239 IPR023485 -
Accr13g00429 251 SUPERFAMILY Phosphotyrosine protein phosphatases I 82 242 IPR036196 -
Accr13g00429 251 SMART LMWPc_2 84 241 IPR023485 -
Accr13g00429 251 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 50 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00429 Accr-Chr13 4279230 4281390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00429 59 245 Protein tyrosine phosphatase (PTP) family AT3G44620 64.789 9.85e-93 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00429 K25307 - qsa:O6P43_000441 337.421