Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00395 ATGGCGGAGGATCGGAACGGTGATAGCAATGAGTTAAGTGATTATAGTTCGGAGGACGAAGGGACTGAGGACTACAGACGAGGAGGTTATCATGCCGTTCGAATTGGTGACACTTTCAAAAATGGGTGCTATGTGGTGCAAAGCAAACTCGGCTGGGGTCATTTTTCTACTGTGTGGCTCGCTTGGGATACCCAGAGATCGCGTTATGTAGCCCTAAAAATTCAGAAGAGTGCCCAGCACTACACTGAAGCTGCGATGGATGAAATAAAGATTCTCAAACAGGTTGCTGAAGGGGACCCTTATGACAAGAAATGTGTCGTCAAGCTTTTAGATCACTTTAAGCATTCAGGACCCAATGGCCAGCATGTGTGTTTGGTTTTCGAATTCTTGGGTGACAATCTTCTGACCGTTATAAAGTATAGTGATTACCGAGGGATTCCTATCTCAATGGTTAAAGAAATTTGTTTCCATATTCTGGTGGGGTTGGATTACTTGCATCGCGAGCTATCTATAATTCACACAGATTTGAAGCCAGAGAATGTCCTGCTTCTGTCGACGATGGATCCATCCAAAGATCCTAGAAAATCTGGTGCACCACTTATCCTTCCAAATACCAAGGATAAGACCATTTCAAAAAGTGGCGCCACAAAAGACAGTAATTATTCTAAAGGGGATCTGACCAGGAACCAGAAAAAGAAATTGCGGAAAAAGGCTAAAAAAGCTGCTCAAAGTTGTGTTGAGAAGGAGATTCCGGAGGAAGACGAGGAGGATTCTAAACCAACTGAAGTAAAAGATTGTGGTGATGATGTGAAAAAGATTGTGGAATCTGAAAATAAACCTAGTAGTCTTGTAACCAAAGATGAACCAATTGAAGTGGTTGAAACCAAGGACATCCCAAAAGGTAGTCATGGCCAACTGAGAGTTAGTCGTTCCATGAAAAAGAAGTTGCTTGCTGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGAAATGCTTGTTGGACATATAAACAATTCACGAATGATATCCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTCTCGGATGCAAATATTCAACTCCAGCTGATCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTTCCACTGGAGATGTTCTTTTTGATCCCCACAGTGAAGACAACTATTCAAGGGATGAGGATCATTTGGCATTGATGATGGAACTTCTTGGATCGATGCCTCAGAAGATTGCTCTAGGTGGTCGCTATTCTCGAGAGTTTTTTAACAGATATGGTGATTTAAGGCACATCCGCCGGTTACGTTTCTGGCCTGTTAACAAGGTGCTGATGGAGAAGTATGGTTTTAGTGAGCAAGATGCAAATGACATGGCGGACTTCCTTGTTCCCCTACTTGATTTTGCCCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTGATCATCCATGGATCTCTGCAGGTCCTCGGACTCTCGAGCCCTCAGTGACTACTGTCCAATCTGAGGCCACAGACAAGGTAATGTCTGAAAAGATGAAGGAAAAGGCTGAGTTGGAGGCAGTTGAAGTTGGTGTGCGGAATATAACCATTGATGGATCTCCAAAGGCACTCCCAGATTCACAGGCTACACGTAGTTAG 1635 0.4367 MAEDRNGDSNELSDYSSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQRSRYVALKIQKSAQHYTEAAMDEIKILKQVAEGDPYDKKCVVKLLDHFKHSGPNGQHVCLVFEFLGDNLLTVIKYSDYRGIPISMVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSTMDPSKDPRKSGAPLILPNTKDKTISKSGATKDSNYSKGDLTRNQKKKLRKKAKKAAQSCVEKEIPEEDEEDSKPTEVKDCGDDVKKIVESENKPSSLVTKDEPIEVVETKDIPKGSHGQLRVSRSMKKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGCKYSTPADLWSFACICFELSTGDVLFDPHSEDNYSRDEDHLALMMELLGSMPQKIALGGRYSREFFNRYGDLRHIRRLRFWPVNKVLMEKYGFSEQDANDMADFLVPLLDFAPEKRPTAAQCLDHPWISAGPRTLEPSVTTVQSEATDKVMSEKMKEKAELEAVEVGVRNITIDGSPKALPDSQATRS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00395 544 ProSiteProfiles Protein kinase domain profile. 44 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00395 544 Gene3D Transferase(Phosphotransferase) domain 1 127 485 - -
Accr13g00395 544 MobiDBLite consensus disorder prediction 1 23 - -
Accr13g00395 544 MobiDBLite consensus disorder prediction 186 269 - -
Accr13g00395 544 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Accr13g00395 544 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 13 503 - -
Accr13g00395 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Accr13g00395 544 MobiDBLite consensus disorder prediction 206 223 - -
Accr13g00395 544 FunFam Serine/threonine-protein kinase SRPK-like protein 314 484 - -
Accr13g00395 544 FunFam CMGC/SRPK protein kinase 30 129 - -
Accr13g00395 544 SMART serkin_6 44 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00395 544 Pfam Protein kinase domain 320 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00395 544 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00395 544 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Accr13g00395 544 CDD STKc_SRPK 33 484 - -
Accr13g00395 544 SUPERFAMILY Protein kinase-like (PK-like) 39 495 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00395 Accr-Chr13 3938477 3941958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00395 1 534 EF-hand Containing Proteins AT5G22840 67.098 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Accr13g00395 Pkinase 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00395 K08832 - gmx:100791829 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03394 1 70431559 70434030 Accr13g00395 13 3938477 3941958 CCT