Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00381 ATGGCGAACGGTAAGGATTCCGACGAGTTCCTGGTGTTGTCGAGGGTCCGGACGGGTCTGAAGAGGGAGTTTGCATTCGCCATGAAGGCTCAATCCGAGATCTGTGGATCTCTGGGACGGACCCGTGCCAGCAAATTCAAGAATGGGGTTCACGAAACTCCCAGCAACAAGAGGTCCAAGAAATCTGGCTCATCTAGGGCTAAGAGAGACGAGCCGAATGGTACGAAGCCTGTGCCCGAGGATGTTGTCGAACCCATTGTTTTGGAAGAGGTCAAAGGAAAGGAGGTAAAGGCTGTACAGGATATGGAGGATGTTATGAGCGAGGAGGAGGCAAAAAGCGATGTGGTGGATTTATCGGGTGACGACGAACCCAAGAACCCAGTGGGTGAGTCGATGGGCACGAGGGAACCCATGGATTGTGATGAGGAGCCCAAGGGCGATGACGTAGAAACTGTAAGCGACGATGAGCCGAAAAGTATTCCAATGTCGGAATCATTGAAGGAAACAACAATGGATGATATAGCGCAACCCATTTGCCAACCCGAGTCCAAGGAACATCAAACAAATGAAGACGATGTCCAGAAGTCTTTAACGACTGAGAACTTGAGGGGAGGAGAGACATGTTCTCCAGATGAAAAGGGTGCTATTGTAACTACTCCTGTTTCGCTTAATGATGACACTAAGGTGAAGGCAATGATAGGGGGTCCAGTGAGGCGGTTTACGCGGTCGGCTCTGAGACAACAGCAAGATGATTCGAAGCTCTCAACTGAAGGAAAAGAAGCTTGTGATACAGCCATTGGACTTGGTGATGTTAGGAGGGAAAGTGAAGATGCTCCATTAATCACTACGCCTCAAACAAAAAGGTCGAAGAATATTGCCTCGAAGAAGAAGTTCCCTTCGAAGCTCAAGGACCTTCTAGCCACCGGGATTCTTGAAGGGCTGCCTGTCCATTATGTTCGGGGAGTGAAGACACGAAGGCCTGGAGAAACAGGGCTCCGAGGAGAGATTAGACGCTCTGGGATTTTGTGCTATTGCGAAGTTTGTAACGGGGTTGAGGTTGTATCACCCACCGTGTTTGAGCTGCACGCCGGTAGTGCAAACAAACGCCCCCCAGAATACATATACCTTGAGAACGGGAATACGCTCCGTGATGTCATGAATACATGTTCGAGCGTTGCAATGGATGTTTTGGAGGAATCAGTACAGAAAATCCTCGGGGACTTCACCTTTAAGAAATCTGCTATCTGTTTGAATTGCACAGAGGCCATGTCTCAAGCTGGCAAGGGATGTTCGAGACTACTCTGCGATACATGCGTGGTCTTTAAAGATTCTCAACCTAGCCCTGTTCGAATAGCTGAGGCTAGCAATTCCTGTTCTTCACCTTTAGTTACTCTCAGTTCTCCTGAACCAGTTGTCGTTCCAACAATACTAAACAGTGGGATGAAGCATTCGAACTACTCTAGGTCTTTAGAACCAGTAGTCGTTCCATCAACTTTAAACAGTGGGATGAAGCACACAACTTCTCGTGGCAAGAGTCAAGGAAGAATAACTAAAAAGGATCTCCGATTGCATAAATTGGTTTTTGAGGAAGATGTGTTGCCTGATGGAACTGAAGTTGCCTACTATGCTCGTGGACAGAAACTCTTGGTGGGTTACAAAAAGGGTTTTGGAATTATTTGTAGCTGCTGTGACACTGAGGTGAGCCCCTCACAATTTGAAGTTCATGCTGGTTGGGCATCGCGACGCAAGCCTTATCTGCACATCTACACATCCAATGGTGTCTCTCTCCACGAATTGTCCATTTCTCTATCAAGAGGTCGGAGGTTTTCTACAAATGAAAATGATGATCTCTGCAGCATCTGCTCAGATGGAGGGAATCTTTTGTGTTGTGATGGATGTCCAAGGGCTTTTCACATAGATTGTGTTCCTCTGCCATGTATTCCAACTGGAACTTGGTATTGTAAATATTGCCAGAACGTGTTCCTAAAGGACAAATATGTGGAGCATAACATGAATGCATTGGCAGCAGGAAGGATTGCAGGGATTGATCCTTTAGAACAGATAAGTCAAAGATGTATTCGCATAGTCAAAACTGTAGAGGTTGACCATGGTGGATGTGCATTATGCAGAAGCCATGATTTCAGCAAGATCTTTGGTCCTCGAACAGTGATTATATGTGATCAGTGTGAAAGGGAATATCATGTAGGCTGTTTGAAGGAGCATAACATGCAGAACTTAGAGGAATTGCCTGAAGGAAATTGGTTCTGCTGCACTGATTGCAGGCGCATTCATTCTGCTCTGCTTAATATGGTCTCTTGTGGGGCAGAGAATCTTCCAGATTCTCTATTAAGTATGATACAAAAGAAGCATGAAGAAAAGGGCCTGGAAAATGGGCATGGTTTAAATATAAAATGGAGAATCTTAAATTGGAAACTAGCTGCTTCTGATGAAACAAGGCAACTGCTTTCGAAGGCTGTTGCAATCTTCCATGAGCGGTTTGATCCAATAGTTGATTCAAGTTCAGGCCGTGATTTCATTCCAACAATGCTTTATGGAAGGAACATTAGGGGTCAAGATTTTGGTGGGATGTACTGTGCAGTGCTAACAGTGGATGGAGTGGTTGTTTCTGCGGGTGTATTTCGTATATTTGGGGCAGAGGTGGCAGAGCTTCCATTAGTGGCAACAATTGCAGATTGCCAAGGAAAGGGTTACTTCCAGTCCCTGTTTTCTTGCATTGAAGGGCTGCTGGGATCTTTAAATGTGAAACATTTCGTCCTACCAGCTGCTGAAGAAGCGGAATCAATATGGAGGAGTAAATTTGGTTTTACCAAGTTAGAACTAGACAAGGTGAACGATTATAAGAGATTCTTTCACATGATGATATTTCAAGGGACCTCTGTGCTGTGGAAGTCAGTTCCTACTCCACCAGAATTGTGTGTCAATGCGGTGTAG 2952 0.4556 MANGKDSDEFLVLSRVRTGLKREFAFAMKAQSEICGSLGRTRASKFKNGVHETPSNKRSKKSGSSRAKRDEPNGTKPVPEDVVEPIVLEEVKGKEVKAVQDMEDVMSEEEAKSDVVDLSGDDEPKNPVGESMGTREPMDCDEEPKGDDVETVSDDEPKSIPMSESLKETTMDDIAQPICQPESKEHQTNEDDVQKSLTTENLRGGETCSPDEKGAIVTTPVSLNDDTKVKAMIGGPVRRFTRSALRQQQDDSKLSTEGKEACDTAIGLGDVRRESEDAPLITTPQTKRSKNIASKKKFPSKLKDLLATGILEGLPVHYVRGVKTRRPGETGLRGEIRRSGILCYCEVCNGVEVVSPTVFELHAGSANKRPPEYIYLENGNTLRDVMNTCSSVAMDVLEESVQKILGDFTFKKSAICLNCTEAMSQAGKGCSRLLCDTCVVFKDSQPSPVRIAEASNSCSSPLVTLSSPEPVVVPTILNSGMKHSNYSRSLEPVVVPSTLNSGMKHTTSRGKSQGRITKKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLVGYKKGFGIICSCCDTEVSPSQFEVHAGWASRRKPYLHIYTSNGVSLHELSISLSRGRRFSTNENDDLCSICSDGGNLLCCDGCPRAFHIDCVPLPCIPTGTWYCKYCQNVFLKDKYVEHNMNALAAGRIAGIDPLEQISQRCIRIVKTVEVDHGGCALCRSHDFSKIFGPRTVIICDQCEREYHVGCLKEHNMQNLEELPEGNWFCCTDCRRIHSALLNMVSCGAENLPDSLLSMIQKKHEEKGLENGHGLNIKWRILNWKLAASDETRQLLSKAVAIFHERFDPIVDSSSGRDFIPTMLYGRNIRGQDFGGMYCAVLTVDGVVVSAGVFRIFGAEVAELPLVATIADCQGKGYFQSLFSCIEGLLGSLNVKHFVLPAAEEAESIWRSKFGFTKLELDKVNDYKRFFHMMIFQGTSVLWKSVPTPPELCVNAV 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00381 983 MobiDBLite consensus disorder prediction 103 172 - -
Accr13g00381 983 SUPERFAMILY FYVE/PHD zinc finger 606 659 IPR011011 -
Accr13g00381 983 MobiDBLite consensus disorder prediction 45 86 - -
Accr13g00381 983 SMART PHD_3 617 658 IPR001965 -
Accr13g00381 983 SMART PHD_3 705 761 IPR001965 -
Accr13g00381 983 ProSiteProfiles Zinc finger PHD-type profile. 703 763 IPR019787 -
Accr13g00381 983 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 604 681 - -
Accr13g00381 983 PANTHER AUTOIMMUNE REGULATOR 73 971 - -
Accr13g00381 983 SUPERFAMILY FYVE/PHD zinc finger 697 763 IPR011011 -
Accr13g00381 983 MobiDBLite consensus disorder prediction 103 124 - -
Accr13g00381 983 FunFam PHD finger family protein 802 971 - -
Accr13g00381 983 ProSitePatterns Zinc finger PHD-type signature. 618 657 IPR019786 -
Accr13g00381 983 CDD PHD1_AIRE 617 657 - -
Accr13g00381 983 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 861 951 IPR016181 -
Accr13g00381 983 ProSiteProfiles Zinc finger PHD-type profile. 615 660 IPR019787 -
Accr13g00381 983 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 605 680 IPR013083 -
Accr13g00381 983 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 700 763 IPR013083 -
Accr13g00381 983 MobiDBLite consensus disorder prediction 37 86 - -
Accr13g00381 983 Gene3D - 802 964 - -
Accr13g00381 983 Pfam Tify domain binding domain 334 389 IPR032308 -
Accr13g00381 983 Pfam Tify domain binding domain 551 599 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00381 Accr-Chr13 3802556 3808384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00381 270 972 PHD Transcription Factor Family AT2G36720 45.321 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00381 - - pcin:129313514 1666.74