Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr13g00377 | ATGGAATTCGAACCCCACTTGCTCCTTCCTTCCCTCCCTCAATCCTCTGATTCCTCTATTCAGCATTTCGGCTGCAAACATTACAGAAGGAGGTGTAAGATCAGAGCACCCTGTTGCAATGGAATTTTTGACTGTCGCCATTGCCATAATGAAGCTAAGAACTCCGAAGATATCAATCCTATCGATCGTCACGATATTCCCCGCCACGACATTATGAAGGTCATCTGTTCCTCATGCGAAACAGAACAAGATGTTCAACAATATTGCATCAACTGTGGAATCTGCATGGGGAAGTACTTTTGTGCTACTTGCAAATTCTTCGACGATGATACCTCGAAGAACCAATACCACTGTGATGAATGTGGCATCTGCAGAACTGGAGGCAAGGATAACTTCTTCCACTGTAAGAAATGTGGTTGTTGCTACTCCAATGTGATGAAAGAAGGACACCAATGTGTAGAACGAGCAATGCATCACAATTGCCCTGTTTGTATTGAGTATCTATTTGATACCCTGAAAGATATCACTGTCTTGCATTGCGGCCATACCATACATTTGGAGTGTCTCAGAGAGATGGGGAAACATTGCGGGTATTCGTGCCCTGTTTGTTCAAAATCCATCTATGACATGTCAAGTACATGGAAGAAGCTTGACCGAGTGATTGCTTCGACACAAATGCCTGAAGCTTACAAAGACAAGATGGTATGGATACTGTGCAATGATTGCGGAGTGAACTCTCAAGTGCATTTCCACGTGGTGGCTCATAAGTGTCAGAGTTGTAACTCATACAACACAAGACAGATACAGGGAATCCCTACCACCGCATGCACTTCTTCGGTGACTGAGGTGGTGAAATGA | 858 | 0.4406 | MEFEPHLLLPSLPQSSDSSIQHFGCKHYRRRCKIRAPCCNGIFDCRHCHNEAKNSEDINPIDRHDIPRHDIMKVICSSCETEQDVQQYCINCGICMGKYFCATCKFFDDDTSKNQYHCDECGICRTGGKDNFFHCKKCGCCYSNVMKEGHQCVERAMHHNCPVCIEYLFDTLKDITVLHCGHTIHLECLREMGKHCGYSCPVCSKSIYDMSSTWKKLDRVIASTQMPEAYKDKMVWILCNDCGVNSQVHFHVVAHKCQSCNSYNTRQIQGIPTTACTSSVTEVVK | 285 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr13g00377 | 285 | SUPERFAMILY | Zinc hairpin stack | 97 | 154 | IPR037275 | - | |
Accr13g00377 | 285 | SMART | ring_2 | 161 | 203 | IPR001841 | - | |
Accr13g00377 | 285 | Gene3D | - | 234 | 274 | - | - | |
Accr13g00377 | 285 | SUPERFAMILY | RING/U-box | 159 | 207 | - | - | |
Accr13g00377 | 285 | Pfam | Zinc-ribbon | 209 | 266 | IPR039512 | - | |
Accr13g00377 | 285 | FunFam | RING finger and CHY zinc finger domain-containing protein 1 | 232 | 275 | - | - | |
Accr13g00377 | 285 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 96 | 160 | IPR017921 | - | |
Accr13g00377 | 285 | ProSiteProfiles | Zinc finger CHY-type profile. | 18 | 94 | IPR008913 | GO:0008270 | |
Accr13g00377 | 285 | SUPERFAMILY | CHY zinc finger-like | 21 | 95 | IPR037274 | GO:0008270 | |
Accr13g00377 | 285 | ProSiteProfiles | Zinc finger RING-type profile. | 161 | 204 | IPR001841 | - | |
Accr13g00377 | 285 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 20 | 269 | - | - | |
Accr13g00377 | 285 | Pfam | CHY zinc finger | 25 | 106 | IPR008913 | GO:0008270 | |
Accr13g00377 | 285 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 143 | 233 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr13g00377 | Accr-Chr13 | 3778618 | 3780982 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr13g00377 | 13 | 279 | C2H2 Transcription Factor Family | AT3G18290 | 38.768 | 5.01e-55 | 189 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr13g00377 | K10144 | - | gmx:100812709 | 487.263 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Accr13g00377 | 13 | 3778618 | 3780982 | Accr13g00377 | 13 | 3778618 | 3780982 | ECH |