Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00341 ATGAACAACATAATCAGGAGTGTTGCTTTGGCCTTCATTGTTGCATTAAGCTGCTATTCGGATCAAGTTTCATGTCAGAACACCAATAAAAGCCAAGCTGCAGTTCAGCTCCTAGCCCAGGCCGTTTATGGAAGCATGTCTAGTTTCACGGGCGTCTTCAAGGACGAAATAAAAAAGAATCTGGGTTTCTGCATTGTTGATGTAGATGCTGATTGGGATGGGGCATTTAATTTCACAAATGATCTGACATTTTTGACCTCATGTTCCCAAACATTAAAAGGAGATATTTCACAGCGCATATGCACAGCAGCAGAAGTTAAGTTATATGCCAGTGGTTTTGACATAAAGTCAAAGAGCCAATCTAACAACTTGCAGCCCAATAAGAACTGTAACTTGAGCGTTTGGCTCAATGGATGTGAGCCTGGATGGGGCTGTAGTGCTGCTGAGAAAGTTCAACTTAACAATACTAAGGACATCCCTGTCAGGTCTACTGACTGTCAGCCTTGTTGTCCGGGCTTCTTTTGCCCAAGAGGAATTACTTGCATGATACCTTGCCCTTTGGGTGCTTATTGTCCCCGTGGACAGCTCAATCAAGCTACTGGAATATGTGAACCGTATCATTATCAGCTACCTTCTGGAAAGTCAAACCACAGTTGTGGGGGAGCAGATGCTTGGGCAGACATTTCAAGCAGTTGGGATATTTTCTGTTCAGCTGGATCTTACTGTCCGTCCACCATCCAAAAAAATCCTTGCACTCAGGGACATTATTGCAGGACGGGTTCAACCGATCAAGAAAGTTGTTTCAAATTGGCGAGTTGTAAGCCTCAATCAGCGAATCAAAATATAACTGCATATGGTGTCATGGTTTTTGCTGGCTTGAGCTTCTTGCTTATCATCATTTATAATTGCTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGAATAGCAAAATCAAGAGAAAGGGCTGCTGCAAGTGTAAGAGAAACACAAGCACGTGAAAAATGGAAATCGGCGAAAGATATTGCTAAGAAGCATGCAGTAGGACTGCAAACTTCTTTATCACGTACGTTTTCTCGTAGAAAATCTATGAAGGGAGATCTAAAAGCGTTTGGTTCTAAATCTGCGTCAGAAACTCCCTTACCACATGTGCCATCAGCAAGTGCTGGTACATCAGGAGCATCAAAAGAAAAAAAGGATAAAAACAGCCTCACAAAAATGATCCAGCAAATTGAGGATGACCCTGATAGCCAGGAAGGCTTTAATGTTGAGATAGGAGACAAAAATATCAAAAAACAGGCACCAAAAGGCAAGCAATTGCATACGCAAAGCCAAATTTTTAAGTATGCGTACGGTCAGATTGAAAAAGAAAAGGCTTTACAGGAAGAAAATAAGAACCTGACCTTCTCTGGAGTTATTTCAATGGCTAGTGATATTGAGATCAGGAGGAGGCCTACAATTCAGGTTTCTTTCAAGGATTTGACCCTCACTTTGAATGCCAAAAACAAGCATCTTCTAAGATGTGTGACTGGGGAACTACATCCTGGTCGAGTTTCTGCAGTCATGGGCCCATCTGGGGCAGGTAAAACAACATTTCTTTCTGCTCTAACTGGAAAAGCAACTGGATGTCATACAACTGGCTTAGTTCTTATAAATGGCAAGGTTGAATCTATCCGGTCATACAAAAAGATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTCGAAGAGAATCTGTGGTTCAGTGCCAGATGCAGGCTTTCAGCTGATCTACCGAAAGCGGAGAAGGTTCTTGTAGTTGAAAGAGTTATTGAGTCATTAGGTCTGCAAGCAATCCGAGATTCGCTGGTTGGAACGGTGGAGAGGCGTGGAATCTCTGGAGGTCAAAGAAAACGAGTGAATGTAGGACTGGAAATGGTTATGGAACCTTCACTCCTGATTTTAGATGAACCGACATCTGGTTTAGATAGTTCATCTTCTCAGTTATTGCTTAGAGCACTTAGACGAGAGGCTTTAGAGGGTGTAAATATATGCATGGTCCTTCACCAGCCAAGTTACACACTGTTCAGGATGTTTGATGATTTTATACTACTCGCTAAAGGTGGTCTTATAGTGTATCATGGACCAGTGAAGAAAGTTGAAGAGTATTTTTCAAGCTTGGGGATTGTTGTTCCTGACCGTGTTAATCCTCCAGATTATTACATAGATATTTTAGAAGGGATAGTAAAACCAAGCTCAAGCACAGCAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTATCCTGTTCCTTTGGACCTGCTTCAGGGTGTTGAAGGAATGGAAGGCACAAGTGGTGAAAGTTCCGCACATGGGGCAGCTACTCCAGAAGCAGAAACCCAAGATCCGTCTTTAGCCGGGGAAATTTGGCAAGATGTAAAAGTCCATGTTGAGAAGAAGAAAGACTATCTTCGATCTACTTTCCTTTCTTCAAATGATTTATCTAATCGGGTAACCCCTGGAGTCTTCCAACAATACAGATACTTTCTAGGAAGAAGTGGTAAGCAGCGGCTACGAGAAGCTAGAACACAGGCTGTAGATTTTCTAATTTTGTTATTAGCTGGAATATGCTTAGGAACACTTGCCAAAGTGAGTGATGAATCGTTTGGAGCAACTGGTTACACATATACCGTCATAGCAGTATCCCTCCTGTGCAAGATTGCGGCTTTGAGAACATTTGCACTGGATAAGTTGCACTACTGGAGAGAGAGTGCATCTGGCATGAGTGGCCTGGCTTACTTTCTTGCAAAGGATACAGTTGATCATTTTAATACACTCATAAAGCCTGTGGTCTATCTCTCAATGTTCTATTTCTTCAACAACCCCAGATCCTCGGTTGTAGATAACTACTTTGTTTTGCTGTGCTTGGTGTACTGTGTCACTGGCATAGCTTATATATTGGCGATCGCACTTGAACCTGGTCCTGCCCAATTGTGGGCAGTGTTACTTCCAGTAGTTTTGACTCTTATAGCAACCAGTGATAGTGTAGCTGATAACTCATTTTTTAGCAATGTAGCTAACGTTTGCTATGCAAAGTGGGCTCTTGAAGCATTTGTGATATCAAACGCTAAAAGATATGCTGGTGTTTGGTTAATAACCCGATGTGGTGCACTAAATATGCGAGGCTATGATCTCAACAACTGGTATCAATGTCTTGTGTTTCTAGTGGTAACCGGGGTACTTAGTCGCATTGTGGCATTCTTTTGTATGATGACTCTACAGAAGAAATAA 3294 0.4199 MNNIIRSVALAFIVALSCYSDQVSCQNTNKSQAAVQLLAQAVYGSMSSFTGVFKDEIKKNLGFCIVDVDADWDGAFNFTNDLTFLTSCSQTLKGDISQRICTAAEVKLYASGFDIKSKSQSNNLQPNKNCNLSVWLNGCEPGWGCSAAEKVQLNNTKDIPVRSTDCQPCCPGFFCPRGITCMIPCPLGAYCPRGQLNQATGICEPYHYQLPSGKSNHSCGGADAWADISSSWDIFCSAGSYCPSTIQKNPCTQGHYCRTGSTDQESCFKLASCKPQSANQNITAYGVMVFAGLSFLLIIIYNCSDQVLATRERRIAKSRERAAASVRETQAREKWKSAKDIAKKHAVGLQTSLSRTFSRRKSMKGDLKAFGSKSASETPLPHVPSASAGTSGASKEKKDKNSLTKMIQQIEDDPDSQEGFNVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKALQEENKNLTFSGVISMASDIEIRRRPTIQVSFKDLTLTLNAKNKHLLRCVTGELHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGLVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKAEKVLVVERVIESLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLIVYHGPVKKVEEYFSSLGIVVPDRVNPPDYYIDILEGIVKPSSSTAVNYKQLPVRWMLHNGYPVPLDLLQGVEGMEGTSGESSAHGAATPEAETQDPSLAGEIWQDVKVHVEKKKDYLRSTFLSSNDLSNRVTPGVFQQYRYFLGRSGKQRLREARTQAVDFLILLLAGICLGTLAKVSDESFGATGYTYTVIAVSLLCKIAALRTFALDKLHYWRESASGMSGLAYFLAKDTVDHFNTLIKPVVYLSMFYFFNNPRSSVVDNYFVLLCLVYCVTGIAYILAIALEPGPAQLWAVLLPVVLTLIATSDSVADNSFFSNVANVCYAKWALEAFVISNAKRYAGVWLITRCGALNMRGYDLNNWYQCLVFLVVTGVLSRIVAFFCMMTLQKK 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00341 1097 Pfam ABC transporter 508 657 IPR003439 GO:0005524
Accr13g00341 1097 MobiDBLite consensus disorder prediction 368 402 - -
Accr13g00341 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 726 IPR027417 -
Accr13g00341 1097 ProSitePatterns ABC transporters family signature. 629 643 IPR017871 GO:0005524|GO:0016887
Accr13g00341 1097 SMART AAA_5 514 715 IPR003593 GO:0016887
Accr13g00341 1097 Gene3D - 486 724 IPR027417 -
Accr13g00341 1097 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Accr13g00341 1097 Coils Coil 393 413 - -
Accr13g00341 1097 Pfam ABC-2 type transporter 686 1097 IPR043926 GO:0140359
Accr13g00341 1097 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 488 730 IPR003439 GO:0005524
Accr13g00341 1097 MobiDBLite consensus disorder prediction 378 392 - -
Accr13g00341 1097 CDD ABCG_EPDR 486 712 - -
Accr13g00341 1097 FunFam ABC transporter G family member 24 482 724 - -
Accr13g00341 1097 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 238 1085 - -
Accr13g00341 1097 MobiDBLite consensus disorder prediction 782 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00341 Accr-Chr13 3433124 3439274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00341 515 718 Calmodulin-binding Proteins AT2G36910 27.803 1.25e-10 63.9