Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00330 ATGGTTTATCTCTGGTTCATTGCCTTACTATGCATTTTTAGTTCAAGCTCTGCTCATCGATTCTATGACTCTACAAATTGTTCCACAGATCCTAACACATACCCAGGTTCGAGGTACACTTGTAAAACTCCCCAAGATCCATGCCAAACATACTTAGTGTTCAGATCGAACCAACATTTTCAGAAGATTTCAGAGATCTCAAAGCTCTTCCACAATGACCCTCACACATTGCTTCAAGAAAATAACCACCTCAACCTCAACTCTTCTTCTCAGTTCATTGAAGCAGGCAAAGAGGTTCTTATTCCTGTCAATTGTTCTTGCTCTGGCGGTTTCTATCAAGTCAGTTTTAGATATGTAGTCCCAGAAAATACAACATTTTCAGAGATTGCCTGTGGGGTTTATGAAGGGCTTCTCAAATCTTCCACGCTCGAACAGGACAACCTTAACACGACCAGAGCTGGTGATGAGCTTAATATTCCTCTTAGATGTGCATGTCCTGATAATTCCAGTACTATTGGCAAGAAGTTGAAGAACCTTATGACATACCCTATAATACTAGGAGATACAGATAGTGCCATAACTGCAAAATTTGGCATCTCAACAGAAAATTTCCGTGAAGTCAATGACTTGCAACAATTTTCAACTCTCTTCCCACAAACAACTGTTTTGATCCCATTGAGAGATGATAAAATCAAGATTATTGATATTCTAGATTCGTCTCCAGCTCCAACCTCTGGTTTTCTCCCAACACTTCCAATGGCGAAAACACGGAAAAATCGAACCAGTTTGTACATAGCAAGTTCTGTCATAGTATCTTTGATACTAATCATGGCAATTCTTGTGGGTGTATTGTATTTTAAGGCCTTAAGGAAATGGAAAAGCGGAGGTGTTCGAGCCTTAACTCCTTCAACCTCCATCGCCATGTCACCAATGAGAGGCTCTTCAACGACTTCATGTCTTTCTCCAGATCTTCTTGCCGGAATAAAGTACTGTTTGGCCAATTACAGCATAGAAGAGCTCAAGATGGCCACGAAAAATTTCAGTGAAGAAACCAAGAAAAGTGGTTCAGTCTTTAAGGGGCTAATCACCAATCTTGAGGTGATGATCAAGAGGATGAGATTCGAAGACACGCGTCGGGTAATTGATTTTCATTCTAAGATCAACCACATCAATATTGTGAACTTACTTGGTGTTTGTTATGATGAGAGTGATTTATCATGGTCATATTTGGTCTTTGAGTGGCCTAAAAATGGGTGCTTAAGGGACTGCTTATCTGATGGATCCAACCTTCTTCGTTGGAAACAGAGGACACAAATAGCTTTTGACATAGCCACAGTTCTTCACTATTTACACTGTTGTGCTTTTCCTTCTTATGCTCATTTGAATGTTAGCAGTCGAAATATATTTATCACAGAAGACTTTAGAGGAAAACTAGCAGATATTGCTGCACCAGAGAACCATGCTAGAGGTCTAGTTTCTGAGAAAGTTGACATTTTTGCATTTGGGGTTGTGTTACTTGAACTGGTCTCTGCAAGAGAGAATATTGAAGGGAAATTAGTGAAAGATTCTATGGGGTTTTTGGGGGAAGGAGGAGGAGGAGGAGGAAATGAAGGCGGTTGCTTTGAAGGGTTGAGGAGTTTCATGGATCCTAATTTGAAGGAAGATTATCATCTTGCAGAGGCTTTGTGTTTGGCTGTTTTAGCAAAGGCTTGTGTAGCTGATGATCCCTTGCACAGACCAACCATGGATGATATCATGAAGGTCCTTGCAAAAATGGTTTCTCCACAACAGCCAGAGAAATAA 1803 0.4038 MVYLWFIALLCIFSSSSAHRFYDSTNCSTDPNTYPGSRYTCKTPQDPCQTYLVFRSNQHFQKISEISKLFHNDPHTLLQENNHLNLNSSSQFIEAGKEVLIPVNCSCSGGFYQVSFRYVVPENTTFSEIACGVYEGLLKSSTLEQDNLNTTRAGDELNIPLRCACPDNSSTIGKKLKNLMTYPIILGDTDSAITAKFGISTENFREVNDLQQFSTLFPQTTVLIPLRDDKIKIIDILDSSPAPTSGFLPTLPMAKTRKNRTSLYIASSVIVSLILIMAILVGVLYFKALRKWKSGGVRALTPSTSIAMSPMRGSSTTSCLSPDLLAGIKYCLANYSIEELKMATKNFSEETKKSGSVFKGLITNLEVMIKRMRFEDTRRVIDFHSKINHINIVNLLGVCYDESDLSWSYLVFEWPKNGCLRDCLSDGSNLLRWKQRTQIAFDIATVLHYLHCCAFPSYAHLNVSSRNIFITEDFRGKLADIAAPENHARGLVSEKVDIFAFGVVLLELVSARENIEGKLVKDSMGFLGEGGGGGGNEGGCFEGLRSFMDPNLKEDYHLAEALCLAVLAKACVADDPLHRPTMDDIMKVLAKMVSPQQPEK 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00330 600 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 595 - -
Accr13g00330 600 Pfam Protein tyrosine and serine/threonine kinase 363 481 IPR001245 GO:0004672|GO:0006468
Accr13g00330 600 SUPERFAMILY Protein kinase-like (PK-like) 334 589 IPR011009 -
Accr13g00330 600 ProSiteProfiles Protein kinase domain profile. 286 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00330 600 Gene3D Phosphorylase Kinase; domain 1 328 414 - -
Accr13g00330 600 Gene3D Transferase(Phosphotransferase) domain 1 482 599 - -
Accr13g00330 600 ProSiteProfiles LysM domain profile. 180 224 IPR018392 -
Accr13g00330 600 Gene3D Transferase(Phosphotransferase) domain 1 416 481 - -
Accr13g00330 600 Pfam LysM domain 187 225 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00330 Accr-Chr13 3175573 3177375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00330 3 597 Receptor kinase-like Gene Family AT2G23770 29.670 1.19e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr13g00330 PK_Tyr_Ser-Thr 1.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00330 - - lja:Lj1g3v4047410.1 628.632