Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00325 ATGGCGGGGAACGACAAGAGCACGAAGGAGAATAATGGGGACGATGATCCGTTGAGGTGGCGGGAAGCGGCGGAGTTGACGAGGGGGAGCCACGTGGGGGAAGTGAGGGGCATGGTGAGAGATTACCGGACCTTCCTCGTGAGGGTGGGAGGCGAATCCTTGACGGTGGGGCAGGTGGCGGCGGTGGCCGAGTCGACGACTAAGGTGGAGCTGGAGGAGAGCAAGAGGGAGGGAGTGGAGGCCAGCAGCGCGTGGGTGATTGAGAGCGTGAAGAAAGGGACGGACAGTTACGGAGTGACGACGGGGTTCGGTGCCACGTCGCACCGGAGAACTGGCCGAGGGATGGCGCTGCAAGCTGAGCTCATAAGGTTTTTGAATGCGGGAATATTTGGGAACAGAACAGAAGCTAGCCAAACCCTGCCGGTAAGTGCATCAAGAGCGGCGATGCTGGTCAGAATCAACACCCTCCTTCAAGGTTACTCCGGCATCAGATATAACATTCTTGAAGCCATTGCCAAATTACTCAACCATGGCATTACTCCATGCTTGCCCTTGCGTGGTTCCATTTCAGCCTCTGGTGACTTAGTCCCATTTTCATACCTCGCCGCACTTTTGACCGGAAGGCCTAATTCAAAAGCCATTGGCCCCGACGGAGAGTCATTGACTCCCTCGGAAGCCTTCCGCTTAGCCTCTATCCATGAAGGCTTCTTTGAGTTGCAGCCTAAGGAAGGTCTTGCACTTGTTAATGGAACTGGGGTTGGTTCTGGATTAGCTTCCGTGGTTCTTTTTGAGGCCAACATTTTAACTGTTTTATCTGTAGTGATGTCTGCAATTTTCGCTGAAGTAATGCACGGGAAGCCGGAGTTTACAGATCATTTGACACACAGATTAAAGCATCATCCTGGGCAGATTGAAGCAGCAGCAATAATGGAACACATTTTGGATGGAAGTGCTTTTGTTAAAGCGGCGAAAAAGTTGCATGAGATTGACCCTTTCCAAAAGCCAAAGCAGGATAGATATGCTCTTAGAACTTCACCTCAATGGCTGGGTCCTCAGATTGAAGTTATCAGGTCATCAACAAAATCTATAGAGAGAGAGATCAACTCTGTGAACGATAACCCTTTGATTGATATATCAAGGAACAAAGTTCTTCATGGTGGCAATTTCCAGGGCACCCCAGTTGGTGTTTCCATGGACAACACAAGACTAGCTCTGGCTGCTATTGGGAAGCTCCTTTTTGCTCAAATGTCTGAGCTGGTTAATGATTTTTATAACAATGGCTTGCCTTCAAATCTTTCTGGAGGACGTTGTCCAAGCTTGGATTATGGATTCAAAGGTGCTGAAATAGCAATGGCTTCATATTGTTCTGAGCTTCAGTATCTGGGAAACCCAGTCACTAATCATGTCCAAAGTGCAGAACAGCACAATCAAGATGTGAACTCATTAGGATTAATCTCTGCAAGAAAAACAGCTGAAGCAATTGAAATATTGAAGCTCATGACTTCAACCTACTTGGTTGCTCTCTGTCAAGCCATAGATTTGAGGCATTTGGAGGATAACTTGAAGAACACGGTTAAGAACACAGTGAGCCAAGTGGCTAAGAAGGTACTAACTGTGGGTGTTATTGGAGAGCTTCCTCCTTCAAGATTTTGTGAGAAAGATTTGCTCAAAGTGGTTGATCTGGAACATGTTTTTGGATATATTGATGACCCCTGTAATGTAACTTATCCTCTGATTGAAAAGCTAAGGCGTGTGCTTGTGGAACATGCATTAATGACAACTAATAATGATGGTTATCCTTCCATATTCCTCAAGATTGTTGCCTTTGAAGAGGAACTGAAGGCAGTGTTGCCCAACGAGGTTGAATCTGCAAGAAATGATTTTGAGAAGGGCATTTCAGCAATTCCAAACAAGATTAAAGATTGCAGGTCCTATCCTATTTACAAGTTTGTGAGGGAGGAGTTGGGGACACGGTTTTTATCCGGAGACAAAAGTCGGTCACCAGGAGAAGATTTTGATAAAGTTTTCACTGCAATTAGTGAACGAAAGTTGATTGATCGAATGCTTGAATGCTTAAAGGATTGGGATGATGCACCTCTTCCCTTACGTTAA 2112 0.4626 MAGNDKSTKENNGDDDPLRWREAAELTRGSHVGEVRGMVRDYRTFLVRVGGESLTVGQVAAVAESTTKVELEESKREGVEASSAWVIESVKKGTDSYGVTTGFGATSHRRTGRGMALQAELIRFLNAGIFGNRTEASQTLPVSASRAAMLVRINTLLQGYSGIRYNILEAIAKLLNHGITPCLPLRGSISASGDLVPFSYLAALLTGRPNSKAIGPDGESLTPSEAFRLASIHEGFFELQPKEGLALVNGTGVGSGLASVVLFEANILTVLSVVMSAIFAEVMHGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSAFVKAAKKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDISRNKVLHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGRCPSLDYGFKGAEIAMASYCSELQYLGNPVTNHVQSAEQHNQDVNSLGLISARKTAEAIEILKLMTSTYLVALCQAIDLRHLEDNLKNTVKNTVSQVAKKVLTVGVIGELPPSRFCEKDLLKVVDLEHVFGYIDDPCNVTYPLIEKLRRVLVEHALMTTNNDGYPSIFLKIVAFEEELKAVLPNEVESARNDFEKGISAIPNKIKDCRSYPIYKFVREELGTRFLSGDKSRSPGEDFDKVFTAISERKLIDRMLECLKDWDDAPLPLR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00325 703 FunFam Phenylalanine ammonia-lyase 518 637 - -
Accr13g00325 703 FunFam Phenylalanine ammonia-lyase 252 546 - -
Accr13g00325 703 Gene3D - 7 251 IPR024083 -
Accr13g00325 703 Pfam Aromatic amino acid lyase 54 528 IPR001106 -
Accr13g00325 703 CDD PAL-HAL 52 515 IPR001106 -
Accr13g00325 703 NCBIfam phenylalanine ammonia-lyase 16 693 IPR005922 GO:0005737|GO:0006559|GO:0016841
Accr13g00325 703 FunFam Phenylalanine ammonia-lyase 7 251 - -
Accr13g00325 703 Gene3D - 518 637 IPR023144 -
Accr13g00325 703 SUPERFAMILY L-aspartase-like 16 702 IPR008948 GO:0003824
Accr13g00325 703 Gene3D Fumarase/aspartase (Central domain) 253 697 - -
Accr13g00325 703 PANTHER HISTIDINE AMMONIA-LYASE 12 702 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00325 Accr-Chr13 3147537 3150288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00325 15 702 Monolignol Biosynthesis Gene Families AT2G37040 74.566 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00325 K10775 - csv:101218156 1079.7