Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00296 ATGCGATTGGTCTGTTGGCAACAGTTAACTCTACTTATAGTGATCCAACTTCTATATCCCAACAAATCCAGCCACACATTATATGCTGAAGCTTTGTTCACTTTCAAGATTACGCTTGGCAGTCCACAGCAAATCTCATGTACTGTTGCAAAATATCCATGTCAAAGACAAAGTGCCCGTCCACACTTCCATGAACTAAAAGACCCAGGTATAACGGGACTAGAAGCAAAGATAGATGGGAGAAATGAAGTTCCAACACTTACCCCTCTGCAAGAAGCTCAAGTTAAAAGACCTGGAGGAACTAGGGTTGCTGCCATTGTTGGTGGTGTTGTAGCTGCCTTACTTGTGATTGTGATAGTTGTAATTGTTTATGCCTGTTTGATGCGTGTTAAGAGATTTATAAGGCAAACATCTGACACTGCTTCTTCTTTTCCATCTCCAGCTGTTGAATTGGGAATAGGCAGCACCTCGCAGGACATAAGACGGTTCACAATCATGGAACTTGAACACGCCACAAGAAATTTCAGTGAAAGTAACCTTGTAGGTGAAGGTAGATTTGGTTTGGTTTACAAGGGTTTACTTCAAGATGGATCTATAGTTGCTATAAAAAGGCGCCGATATGCTTTGACTCACAGTTTCATTTCTAAGGTGATGCAAATAGCTAATATTCACCACATCCATCTTGTCAAGCTTATTGGTTATTGTGAAGATGGCTATCAACAGTTACTTGTGCATGAATATCTTCCAAATGGACATGTAGGGAATCACCTATATGACAATGAAGGTTTACCAATCGGAAGGTTAGATATGAAGCGGAGATTATCTGCAGCTTTGGGTGCTTCCAAAGGAATGGAACATCTTCACAGCTTGGTTCCTCCTTTGGTGCACACCAATCTCAGAACTAGCAATGTTCTTGTGGATGAAAGCTTCACTGCCAAGGTTTCTGATTATGGACTCTGCAAGCTGCTAACTAATTCTGACCATAATGCTGGCTCATCCTCTAACACAGACTGCTTTCATGATCCAGAGTTGAACCAATCAAAGGACTTTTCAAAGAAGAGTGATGTATACAGTTTTGGGGTCTTCTTACTTGAATTGATCAGTGGACGAGAAGTGCACAACAGAAGCCTCTTAAACTCGCAAGAGAATTTGGTATTTCAGGTTAAGAACAGCCATGGCTCTTTGGAAGATTTTGTGGACACAACACTAGGTGGGCATGAAAAGCAAGCTGCAAAGAAGATATTGAAGTTGGCGATAATGTGTTTAAACAAGAGTATTACAAGACCGTCAATGGGACAAATTGTACGAGAGTTGGAGCTGATTCAAAGAGAATTTAGTGCTTTACATTCTTACAGCAGTGAGGAAATTGGTGGGGTCACACTTGGGAGTGATCTCTTCAAGTAA 1404 0.411 MRLVCWQQLTLLIVIQLLYPNKSSHTLYAEALFTFKITLGSPQQISCTVAKYPCQRQSARPHFHELKDPGITGLEAKIDGRNEVPTLTPLQEAQVKRPGGTRVAAIVGGVVAALLVIVIVVIVYACLMRVKRFIRQTSDTASSFPSPAVELGIGSTSQDIRRFTIMELEHATRNFSESNLVGEGRFGLVYKGLLQDGSIVAIKRRRYALTHSFISKVMQIANIHHIHLVKLIGYCEDGYQQLLVHEYLPNGHVGNHLYDNEGLPIGRLDMKRRLSAALGASKGMEHLHSLVPPLVHTNLRTSNVLVDESFTAKVSDYGLCKLLTNSDHNAGSSSNTDCFHDPELNQSKDFSKKSDVYSFGVFLLELISGREVHNRSLLNSQENLVFQVKNSHGSLEDFVDTTLGGHEKQAAKKILKLAIMCLNKSITRPSMGQIVRELELIQREFSALHSYSSEEIGGVTLGSDLFK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00296 467 Gene3D Phosphorylase Kinase; domain 1 150 247 - -
Accr13g00296 467 ProSiteProfiles Protein kinase domain profile. 175 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00296 467 Pfam Protein tyrosine and serine/threonine kinase 179 438 IPR001245 GO:0004672|GO:0006468
Accr13g00296 467 SUPERFAMILY Protein kinase-like (PK-like) 157 446 IPR011009 -
Accr13g00296 467 FunFam receptor-like serine/threonine-protein kinase NCRK 152 247 - -
Accr13g00296 467 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 113 440 IPR047117 -
Accr13g00296 467 Gene3D Transferase(Phosphotransferase) domain 1 248 457 - -
Accr13g00296 467 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00296 Accr-Chr13 2832351 2834971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00296 163 438 Glycoside Hydrolase AT3G07070 39.310 4.68e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Accr13g00296 PK_Tyr_Ser-Thr 6.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00296 - - gmx:100780443 569.311