Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00281 ATGTTCAAAAAGAGTTTCTCTATTACAATAACGATGGGCTGCTGTGGCTGCTTTGGGTTCATAAGAAAATTCAAACGTTGCAGAAATCAGTCTGGCATCAAGACTAGTATCTCTCAGGACCCATTGTTGGATGAAACTGAAGATAGAGAAGAAGAAGATGATGACGATAATGATGATGATAGATCATATAATGGTGATCTTACTGACACCATTAGTGGAGATGATAGTGAAGTTCCCATTCGTGCCAAACGTTCTGAGGAAATTTTAATGTTGAGAGAAGAGAAAGATATGATATGTAGGCAGTTTCCTGTTAAGGAAACTTACAAAGCTGTTCGTGCTGAGGATGAAAATGGTAACAAGATGGTGAATGAATATGTTCGGGAGTACAAGATTGGTTCTGGTAGTTATGGGAAAGTGGTTTTGTACCGAAGTTGTGTAGATGGAGAGTATTATGCAATCAAGGCCTTTCACAAGTCTCATCTACAGAAGCTTCGAGTTGCACCCTCAGAGACTGCCATGACTGATGTTCTGCGGGAGGTACTCATCATGAAAATGCTGGAACATCCTAACATAGTCAATCTCATTGAGGTCATTGATGACCCAGAATCAGATCACTTCTACATGGTACTTGAATATGTAGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCCTTCTTGTAGCCTGGGTGAGGAGACTGCTAGGAAATACTTGCGTGACATAGTTTCAGGATTAAGATATCTGCATGCTCATAATATAGTGCATGGGGATATTAAACCTGATAATTTGTTGGTTACACGTCACGGTACAGTAAAGATTGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAATGATGTGCTTCGCCGATCTCCTGGGACTCCTGTTTTCACTGCCCCAGAATGTTGTTTAGGTCTCACCTATAATGGTAAAGCTGCAGACACATGGGCAGTTGGAGTTACTTTGTACTGCATGATTTTGGGTGAATACCCATTTCTTGGAGACACGCTTCAAGATACGTATGACAAAATAGTCAATAACCCATTAGTGCTCCCAGATGATTTGAATCCCCAAATAAGGAGTTTACTGGAAGGATTACTTTGTAAAGATCCTAAACATCGGATGACATTGGCTGATGTGGCGCAGCATAGCTGGGTTATTGGAGATGATGGGCCAATTCCTGAATATTTGTGTTGGTGCAAACGCAAGAGATTAGGAGGAGAAGATTTAAACAGCGACAACCTACTTGCTTGA 1254 0.4139 MFKKSFSITITMGCCGCFGFIRKFKRCRNQSGIKTSISQDPLLDETEDREEEDDDDNDDDRSYNGDLTDTISGDDSEVPIRAKRSEEILMLREEKDMICRQFPVKETYKAVRAEDENGNKMVNEYVREYKIGSGSYGKVVLYRSCVDGEYYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGSGPSCSLGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDVLRRSPGTPVFTAPECCLGLTYNGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDDLNPQIRSLLEGLLCKDPKHRMTLADVAQHSWVIGDDGPIPEYLCWCKRKRLGGEDLNSDNLLA 417
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00281 417 MobiDBLite consensus disorder prediction 44 62 - -
Accr13g00281 417 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Accr13g00281 417 SUPERFAMILY Protein kinase-like (PK-like) 122 397 IPR011009 -
Accr13g00281 417 CDD STKc_LKB1_CaMKK 131 386 - -
Accr13g00281 417 Gene3D Transferase(Phosphotransferase) domain 1 223 392 - -
Accr13g00281 417 Pfam Protein kinase domain 125 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00281 417 SMART serkin_6 125 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00281 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Accr13g00281 417 MobiDBLite consensus disorder prediction 38 75 - -
Accr13g00281 417 ProSiteProfiles Protein kinase domain profile. 125 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00281 417 FunFam Serine/threonine-protein kinase Ssp1 119 221 - -
Accr13g00281 417 FunFam Serine/threonine-protein kinase GRIK2 115 414 - -
Accr13g00281 417 Gene3D Phosphorylase Kinase; domain 1 119 221 - -
Accr13g00281 417 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 67 388 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr13g00281 Accr-Chr13 2719776 2724183 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00281 131 392 CBL-interacting serine-threonine protein kinases AT5G10930 32.830 1.90e-43 155
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Accr13g00281 Pkinase 1.5e-58 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00281 K00908 - zju:107411351 641.728