Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00276 ATGGCTTCTTCCAAAAATTCCAAGACAGAACACGAGAGCGAAGCTGCTGACAGCTCCAAACCAGCGAACAAAGCCGCTAAACCCAGAAAAGAGAAACACCTGGACAAGAAAAGCAAGACTATTAAGAAGAAAAAACTTAACAGCCTTGATGTGAATAAGGACGATAAAGCGATCGTTGTTCCTTCTTCCAGTACCGAGTCCCATGAAAAATTCGAAGAGGAAGAGCGTCTGGAAGACAAGACTGAGATCACAAATGGCCGAACCAGTGCAATTAAACCCAAAAAAATCAAAGTCAAAGGAATCAAATATGATGACGAAGACGAAGCTGAAGGCAAAGGAGACGCCAAGGGCAATGTATTTCCCATGAATCGTATCCGGACGATAATTAGGGGCCAAGATCTTGAATTTCGTGTTTCCCAGGAAGCCATATTTGCCATCAACAAAGCCACGGAGATGTTCCTTGAACAATTTACGCGGGACAGTCATGCTACCTGTGTTCGAGATCGAAAAAAATCTCTGGCTTACAAACACCTTTCATCTGTTGTAAGTCAGCAGAGCAGATACGACTTTCTATCAGATTTTGTTCCGGAGAAAATAAAAGCAGAGGATGCCTTAAGGGAGAGAAATTCCAGTGTAAATGGTGGTTAG 648 0.429 MASSKNSKTEHESEAADSSKPANKAAKPRKEKHLDKKSKTIKKKKLNSLDVNKDDKAIVVPSSSTESHEKFEEEERLEDKTEITNGRTSAIKPKKIKVKGIKYDDEDEAEGKGDAKGNVFPMNRIRTIIRGQDLEFRVSQEAIFAINKATEMFLEQFTRDSHATCVRDRKKSLAYKHLSSVVSQQSRYDFLSDFVPEKIKAEDALRERNSSVNGG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00276 215 Gene3D Histone, subunit A 62 197 IPR009072 GO:0046982
Accr13g00276 215 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 120 182 IPR003958 -
Accr13g00276 215 MobiDBLite consensus disorder prediction 7 29 - -
Accr13g00276 215 MobiDBLite consensus disorder prediction 66 85 - -
Accr13g00276 215 SUPERFAMILY Histone-fold 137 198 IPR009072 GO:0046982
Accr13g00276 215 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 85 210 - -
Accr13g00276 215 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00276 Accr-Chr13 2682240 2684510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00276 85 181 CCAAT-HAP5 Transcription Factor Family AT1G07980 40.206 1.16e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr13g00276 CBFD_NFYB_HMF 1.9e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00276 - - bhj:120089488 164.081