Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00269 ATGGAGGAGGACAAAGTAGTGCGCTTTAACAACACATTTCTACCTGGTTTTAGGTTCCATCCATCTGATGAGGAACTGATAGTTCATTACTTGAAGAAGAAGATCAACTCTCATCCACTTCCAGCACCTATCGTTGCTGAAATCAATCTTTATAAGTTTAACCCGTGGGACCTACCTGATAAGGCCTTGTTTGGAGAGGACGAGTGGTATTTCTTTAGCCCAAGAGACAGGAAATATCCAAATGGGTTAAGACCAAACAGGGCAACACCTTCTGGGTATTGGAAGGCGACTGGAAGCGACAAGCCAGTTCTGAGTCGGCCTGGATCAAAGCTGATAGGATCGAAGAAAGCTTTGGTTTTTTATTCAGGTCGTCCTCCTAAAGGCACTAAGACTGATTGGATCATGAATGAATATAGATTGGTTGACAACACAATCAGAAAACCTTCTAGGTTCAAAGGTTCCATGCGATTGGATGATTGGGTCCTATGTCGGGTTCGATATAAAGACTACTCATCAAATAATAGAGGAGGTGAGATTCAAGAGAAATGTGCCTCAAAATTGAATCTACCAACCATCACAGATTATCATCAAATGTTAGCTTCTGTTGTTCTTGACGATGAACCAAATAAGCTTCCCTGTGACAACATGAGTGGTATGAACTTTAGAAGCAGCAAAGCCAACAGTTTTTGTCCAGTGAGTCCTCAGATGACAACAATTCCTTCGTTGGACAACTTCAGTTGCTTCGATTCGCTGAAAAGAGTGTCTAATGAGGATAGTCAACGTGGATTAAATCTCATTTCTTTTAACAGTGGCAAGCCAAACCCTGAGAATTACAAGATTGATAATGTTACAGATACAAACTGCTATAGCCACAGCGTGTGCGATGATGGATCTCTTGGACAGAGAATAGTAGATTCCGGAATCCATTTTCAAGAACTAAATGAGCTACCCTTTACAGGAAGGTTCATGCAATGGAGAAATGATTAG 987 0.4124 MEEDKVVRFNNTFLPGFRFHPSDEELIVHYLKKKINSHPLPAPIVAEINLYKFNPWDLPDKALFGEDEWYFFSPRDRKYPNGLRPNRATPSGYWKATGSDKPVLSRPGSKLIGSKKALVFYSGRPPKGTKTDWIMNEYRLVDNTIRKPSRFKGSMRLDDWVLCRVRYKDYSSNNRGGEIQEKCASKLNLPTITDYHQMLASVVLDDEPNKLPCDNMSGMNFRSSKANSFCPVSPQMTTIPSLDNFSCFDSLKRVSNEDSQRGLNLISFNSGKPNPENYKIDNVTDTNCYSHSVCDDGSLGQRIVDSGIHFQELNELPFTGRFMQWRND 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00269 328 Gene3D NAC domain 22 172 IPR036093 GO:0003677|GO:0006355
Accr13g00269 328 ProSiteProfiles NAC domain profile. 13 168 IPR003441 GO:0003677|GO:0006355
Accr13g00269 328 FunFam NAC domain-containing protein 72-like 22 173 - -
Accr13g00269 328 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Accr13g00269 328 SUPERFAMILY NAC domain 11 168 IPR036093 GO:0003677|GO:0006355
Accr13g00269 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00269 Accr-Chr13 2609082 2610469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00269 15 171 NAC Transcription Factor Family AT1G61110 67.683 2.09e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr13g00269 NAM 8.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00269 - - ccaj:109819036 347.051