Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00267 ATGAGCGTCATAGATATTATCTTCAGGGTCGATTCGATATGCCAACAATACGACAAATACGACATCGATAAGCAGCGAGAGCTCAATGCCTACGGTGACGATGCTTTTGCTCGCCTCTACGCTGCCGTCGAAAGCAACATTGAATCCGCCCTTCATAAATCGGAAATTGCTTTTAATGAGACGAACAGGGCATCTGCGGCGGCATTGAACGCGGAAGTTCGTCGGACAAAAGCTCGGCTCATGGACGAAGTCCCTAAGCTTCGTAAACTGGCGCAGAAGAAGGTTAAGGGTCTTTCAAGTGAAGAAATGGCTATTAGGAATGATATGGTTCTGGCGTTGCCAGAAAGGATCCAAGCAATTCCAGATGGCATAACTGGTGCAGCTAATCAAGCTGCAGGAGAAGGGTTTTCTCTCTCATCTCATCAGAATATTAGGTTTGATTCATCAGAAGGATACAAGGACGATCTATACTTCCAACAAACTGAAGAATCAAGTCAGTTTAAATCAGAGTTTGAGATGCGAAAAATGAAACAGGATGAAGGGCTTGGTATCATATCAGACGGATTGGATACGTTGAAGAATTTGGCCCTTGACATGAATGAGGAAATGGACCGGCAAGTTCCATTAATAGATGAAATCGGAACAAAGGTTGATAAGGCCTCATCCGACCTTAGAAATAATAACACGAGACTGAGGAAAACTCTCAACGAGGTGAGGTCTAGTCGAAATTTATGCATTGACATCATTCTGCTGTGCGTTCTCCTTGGCATTTTTTCCTACATATACAATATACTGACGCAGTGA 804 0.4353 MSVIDIIFRVDSICQQYDKYDIDKQRELNAYGDDAFARLYAAVESNIESALHKSEIAFNETNRASAAALNAEVRRTKARLMDEVPKLRKLAQKKVKGLSSEEMAIRNDMVLALPERIQAIPDGITGAANQAAGEGFSLSSHQNIRFDSSEGYKDDLYFQQTEESSQFKSEFEMRKMKQDEGLGIISDGLDTLKNLALDMNEEMDRQVPLIDEIGTKVDKASSDLRNNNTRLRKTLNEVRSSRNLCIDIILLCVLLGIFSYIYNILTQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00267 267 Pfam SNARE domain 209 258 IPR000727 -
Accr13g00267 267 SUPERFAMILY SNARE fusion complex 168 233 - -
Accr13g00267 267 CDD SNARE_Qc 177 233 - -
Accr13g00267 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 172 234 IPR000727 -
Accr13g00267 267 PANTHER SYNTAXIN 52 251 IPR045242 -
Accr13g00267 267 Gene3D - 172 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00267 Accr-Chr13 2605625 2607535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00267 1 265 SNARE and Associated Proteins AT3G09740 63.534 1.84e-126 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00267 K08506 - gmx:100777251 372.859