Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00254 ATGGAATCCAGTGAGCCAATCCCAAACACTCCAAGTCCCACTTGTTCTTTCCCTATCTCAAACTCTTCTCCTTCTTCCTCATGTTCGCCTCCTCCACAAGTGGTGGTAAGCCCTTGTGCTGCTTGTAAGATTTTAAGGCGGCGATGTGCTGAGAAATGCGTTCTCGCTCCCTATTTCCCTCCTTCTGAACCTGCCAAGTTCACCATTGCTCACAGAGTCTTCGGTGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCACAGAGGGCTGATGCAGTGAGCAGCATGGTGTACGAGGCAGGTGCAAGAATAAGAGATCCAGTGTATGGTTGTGCAGGTGCGATTTGTCAGCTTCAGAAGCAAGTGAGCGAGCTTCAAGCTCAACTGGCTAAGGCTCAAGCTGAGCTTGTGAACATGCAGCTGCAGCAAGCCAATCTGGTGGCTCTTCTCTGCATGGAAATGGCTCAAACTAGCCAGACTCAGACTCAGACTCAAACGTCTCCTACAAGTACTCCTCCTCCTCAGGAATATTATTCTTCACCGCCATCATTATCTTCATCGTTCGAAGACACAAACTTCATTACTTCAAGCAACCTCAACTTCTTCGCCGAAGGCACTGGCCTTAACTCTTTGTGGGAGCAGCCACTTTGGACATGA 663 0.4902 MESSEPIPNTPSPTCSFPISNSSPSSSCSPPPQVVVSPCAACKILRRRCAEKCVLAPYFPPSEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEAGARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQLQQANLVALLCMEMAQTSQTQTQTQTSPTSTPPPQEYYSSPPSLSSSFEDTNFITSSNLNFFAEGTGLNSLWEQPLWT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00254 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 37 174 - -
Accr13g00254 220 MobiDBLite consensus disorder prediction 162 186 - -
Accr13g00254 220 Coils Coil 117 144 - -
Accr13g00254 220 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Accr13g00254 220 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00254 Accr-Chr13 2460913 2461988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00254 33 220 AS2 family AT1G07900 62.632 5.59e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr13g00254 LOB 2.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00254 - - gmx:100789504 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03484 1 71331827 71332515 Accr13g00254 13 2460913 2461988 CCT
Accr13g00254 13 2460913 2461988 Accr13g00254 13 2460913 2461988 ECH