Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00246 ATGGATTACATCGACAACTTGCCGCCGATGGATCTGATGCGCTCCGAGAAAATGACCTTCGTTCAACTCATCATGCCCGTCGAGTCCGCTCATCGAGCTGTCTGTTATTTGGGCGAACTTGGCCTACTCCAATTCCGAGATATGAATGATGATAAAAGCCCCTTCCAAAGAACCTTTGCTAATCAGGTAAAGCGGTGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGTCTAGTGTGTTCTCCTTGCCTTGCCTTTCAACCTGATATTGAGTTAGAGGAACTAGAGGCACAGCTTGCTGAACATGAACATGAGCTAAATGAAATGAACTCTAATAGTGAGAAACTTCAGCAGACATATAATGAGCTCCTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGCATCAAGTCATAGCCATGCTGCAATAGAGGAGAGAGAACTGGATGAGCATGCATACTCTAACAGTGATGATTATGTTGAGGGTGCATCTTTGCTTGAACAGGAAACAAGGCCAGCATCGTCAAATCAATCTGGTTTAAGATTTGTCAGTGGGATAGTTTGTAAATCTAAAGTTCTTAGGTTTGAAAGGATGCTGTTTCGCGCTACAAGAGGCAATATGTTTTTCAACCAGGCACCAGCTGATGAACAAATCATGGATCCTATTTCAACAGAGATGGTTGAGAAGACAGTGTTTGTTGTATTTTTCTCTGGAGAGCAAGCAAGACTAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCACATTGTTACCCTGTGCCTGAAGATATACATAAACACAGGCAAATAACTAGGGAGGTTTCATCACGTCTTGTTGACTTAGAAGCAACTTTGGATGCTGGTATTAGGCACAGGAATAAGGCCCTTGCTTCCATAGAGGGTCATTTAGCAAAATGGATAAATATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTCAACATGCTTAATTTTGATGTCACAAAAAAATGTCTCGTTGGAGAGGGATGGTGCCCCATATTTGCGAAAACTCAGATCCAGGAGGCACTGCGTCGTGCAACCTTTGATAGTAGTTCTCAAGTTGGCATAATCTTTCATCCCATGGATGCAGTGGAATCACCACCTACTTACTTTAGAACTAACCGCTTCACTAGTGCTTTCCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTTCAGTTTACACAGTAATTACATTCCCATTTCTTTTTGCTGTGATGTTTGGGGACTGGGGTCATGGAATCTGCCTGTTGCTAGGAGCACTATTTCTTATAGCTCGTGAAAGCAAGCTCTGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGAGGGCGCTATGTGCTTCTTTTGATGGCACTGTTTTCAATCTATTGCGGGCTAGTCTACAACGAATTCTTCTCTGTTCCTTTTCACATTTTTGGCAGATCTGCTTATGAATGCCGAGATACTTCTTGCAGGGATGCACAGACTGCTGGCTTACTCAAACGCCATGATACATACCCTTTTGGTGTGGATCCCAGCTGGCGAGGAAGTCGATCAGAACTGGCTTTTCTGAACTCACTCAAGATGAAGATGTCCATTCTTTTGGGAGTGGTACAGATGAACTTAGGAATTCTAATAAGTTATTTCAATGCTCGTTTCTTTGGTAACTCTGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTATTGTTAAGTGGTGTACTGGGTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTTTAAGTCCAACTGACAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGTTTATTCAGATTGTGTTATTGCTATTGGCTTTAGTTGCGGTTCCATGGATGCTCTTTCCAAAACCTTTTATATTAAAGAAGCTTCATACAGCGAGATATCAAGGACATGCTTATGGTAGGCTCAATACATCTGAGATGGATCTCGAGGTGGAACCAGATTCTGCTAGGGCTAGGCAACACCACGAGGAATTTAATTTTAGTGAGGTCTTTGTTCACCAAATGATCCACTCCATTGAGTTTGTCCTTGGTGCAGTTTCAAATACAGCATCATACCTTAGACTCTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTCTATGAAAAAGTCCTCCTTCTTGCTTGGGGGTATGACAATCTGATCATTCGGTTAGTGGGCCTAGCTGTGTTTTCCTTTGCAACCGCCTTTATACTGCTCATGATGGAGACGCTGAGTGCTTTCCTACATGCCCTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGGGATGGCTACAAGTTCAGACCTTTTTCCTTTGCCTCATTAGCAGAGGATGATGATTGA 2466 0.4209 MDYIDNLPPMDLMRSEKMTFVQLIMPVESAHRAVCYLGELGLLQFRDMNDDKSPFQRTFANQVKRCAEMSRKLRFFKDQINKAGLVCSPCLAFQPDIELEELEAQLAEHEHELNEMNSNSEKLQQTYNELLEFKIVLQKACGFLASSHSHAAIEERELDEHAYSNSDDYVEGASLLEQETRPASSNQSGLRFVSGIVCKSKVLRFERMLFRATRGNMFFNQAPADEQIMDPISTEMVEKTVFVVFFSGEQARLKILKICEAFGAHCYPVPEDIHKHRQITREVSSRLVDLEATLDAGIRHRNKALASIEGHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALRRATFDSSSQVGIIFHPMDAVESPPTYFRTNRFTSAFQEIVDAYGVARYQEANPSVYTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKLCTQKLGSFMEMLFGGRYVLLLMALFSIYCGLVYNEFFSVPFHIFGRSAYECRDTSCRDAQTAGLLKRHDTYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVVQMNLGILISYFNARFFGNSVDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRFIQIVLLLLALVAVPWMLFPKPFILKKLHTARYQGHAYGRLNTSEMDLEVEPDSARARQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLAEDDD 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00246 821 PIRSF ATP6V0A1 8 821 IPR026028 GO:0000220|GO:0046961
Accr13g00246 821 Pfam V-type ATPase 116kDa subunit family 37 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
Accr13g00246 821 Coils Coil 99 133 - -
Accr13g00246 821 PANTHER VACUOLAR PROTON ATPASES 12 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00246 Accr-Chr13 2355298 2363957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00246 2 814 Primary Pumps ATPases(2) AT2G28520 79.730 0.0 1338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00246 K02154 - zju:107411281 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03490 1 71366236 71374290 Accr13g00246 13 2355298 2363957 CCT