Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00219 ATGTACCCACACTCTAACGCTACATTCTCACGCGCCGCCAACTCCATCGATCATTCGCCATCGCCAACCTCAACCACCGCTCCACTACCCTACCCCTCACTTACGTCAATGCATTCCATCTCCACTTCTCAGCCACACTTTATTATTCCCGACCAGTTCGCCGTCACTGATTTTGACTCGCTGCTCAAGTCGGAGATGAGCCTCAACAATAGTTGCAGCAGCGGTTGTAGCAGCTACGGCTCGCCCAGGTCGCTGGGGACCTATAAAACTCAACGACCAAGCTTGATGCAGCGGAGCGTGAGCAGCCACTCGCTCCATAAGAATGAACATCGCCAACATATCTCTGCTCTGTTTGCCAAGTTTTTCGACTCCGACGACAGTCCGGTACGCCGAGTTTACAGCACCGGTGATTTGCAGAGGAATAATCAAGGGTCAGAGATTGCATTGTCAAGCGAAAGTAGTATGATCATAGAAGGAATGAGCAGAGCATGTCGCTATAGTCCCGAGGAGAAGAAGGTGAGGATTGAGAGATATAGAAGCAAGCGAAATCTGAGAAACTTCAACAAGAAAATCAAGTATGCTTGCAGGAAGACATTAGCAGACAGCAGGCCACGTATCAGAGGAAGATTTGCGAGGAACGAAGAAACTGAGAAGAACCCTGAAGTTCAATGGAGCCATGATGGTGTTGGAGCTGAGGAAGAAGATGAAGAAGAAGAGAATTGGTTTCATTTGTTTGAAAATTTAGTTGCTGCAAATAATCATGTTCAAGAGCCTCATGATAGTAATTCTTCATTTGGTCTCATGTTTTAG 810 0.4704 MYPHSNATFSRAANSIDHSPSPTSTTAPLPYPSLTSMHSISTSQPHFIIPDQFAVTDFDSLLKSEMSLNNSCSSGCSSYGSPRSLGTYKTQRPSLMQRSVSSHSLHKNEHRQHISALFAKFFDSDDSPVRRVYSTGDLQRNNQGSEIALSSESSMIIEGMSRACRYSPEEKKVRIERYRSKRNLRNFNKKIKYACRKTLADSRPRIRGRFARNEETEKNPEVQWSHDGVGAEEEDEEEENWFHLFENLVAANNHVQEPHDSNSSFGLMF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00219 269 ProSiteProfiles CCT domain profile. 171 213 IPR010402 GO:0005515
Accr13g00219 269 MobiDBLite consensus disorder prediction 210 232 - -
Accr13g00219 269 MobiDBLite consensus disorder prediction 1 30 - -
Accr13g00219 269 Pfam CCT motif 173 213 IPR010402 GO:0005515
Accr13g00219 269 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 65 240 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00219 Accr-Chr13 2093225 2095427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00219 159 229 C2C2-CO-like Transcription Factor Family AT5G24930 43.662 1.01e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr13g00219 CCT 2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00219 - - qlo:115950643 245.743