Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00217 ATGATGGATGGTAGAAAATTTACCTTTATCTTTGGCTTTTCAATTTTGCCGCTGCTATGCTTTTCTGCCAGCTTCGTTCCACAAGATAATTATCTTATAGACTGTGGAGCAGCTTCAAATACTTCATTCGGTGGCCGAAATTTCACGGCAGATGCGTTCTACAAGGATCTCCTTTCTACCAAACGTGATGTTCTCGCTACTACCTCTTCAAAATCAATCGCTTCCTCTGCCGATTCACCTCTCTATCAAACAGCAAGAATCTTCAATGAGCAGTCAAAGTACAAATTCTCCATCAACCAAAAGGGTAGACATTGGATCCGTCTCTATTTCTATCCATTTCAGTATCAGAACATAGATATGAGTACTGCAAATTTTTCTGTCACTGCCCAAAACAATGTCCTTCTCAGCGACTTCGCTGTGCAGAAAAATCCTGTTATGAAGGAATACTCTGTGAATGTGACTTCAGACAACCTTGTGATCACCTTTACGCCTTCCAAAAATTCCATTGCGTTCGTAAATGCCATTGAAGTTGTTTCATTACCCGATGAACTCATTGCTGATGATGCCTCCTCCTTAAATCCACCAGGAAGTTTCACTGGGTTGGTGACACTAGCATTTGAGACAGTTTGGAGGATTAACATGGGTGGTCCATCTATCTCCCCAGCAAATGATACCCTTCGCCGGACCTGGGTACCAGACCAAAATTTTCTTGTCACTCCTAACCTTGCTACCAATGTTACAAATATGGCTGCCGTTACATATGCAGATGGTGGGCCAACGGAGAATATTGCTCCACGTTCAGTCTATGGTACTGCCACAGAAATGAACTCAAGCAGTGATCCTCGTAGTAATTTCAATGTGACATGGCAGTTTGATGTCGATCCAGGATTTCAGTATCTTGTTCGACTTCATTTTTGTGACATAGTTAGCAAAAGTCTCAACGAACTCTACTTCAATGTCTATGTCAACTCTTACATGGCGGACAAAGATATGGACCTCAGCGTTTCGAGTAACAATGTTTTGGGTGCTCCATTTTACAAGGATTTTGTTACGGGCCCAACTGATGGCAAGAAAATTCGAGTGAGTGTCGGCCCTTCTTCTTTAAACCGTGATTACCCGAACGCCATTTTGAATGGGCTGGAGATCATGAAAATGAGTAATTCTAAGGGCAGTCTGAGCGTAGCAACAGCTGTGATTGGTACTGGTTCAAGCTCAAAGAATAAAGTAGCCATTATAGTGGGTGTGGTAGTGGGGACATTGTGTGCAATGGTCTTGGCTGGATTTTTCTTTGTATTCTGCAGAAGAAAACGTTTGAGACGACAAGGCCTTTCAAAGACATGGGTTCCAATATCCATTAATGATGGAATCTCTCATACCATGGGAAGTAAATACTCTAATGGCACAACACTAAGTGCTGCTTCCAACTTAGGGTATCGTATCCCATTTGTGGCAGTTCAGGAGGCTACAAACAATTTCGATGAGAGCTGGGTTATTGGGATAGGTGGTTTTGGGAAAGTGTACAAGGGAGAACTAAATGATGGCACTAAGGTGGCAGTTAAGAGAGGGAATCCTCGGTCCCAGCAAGGGCTTGCAGAGTTTCGAACTGAAATTGAAATGCTATCTCAGTTCCGTCATCGCCATTTGGTGTCATTGATAGGGTATTGTGATGAGAAAAATGAGATGATCTTGATATATGAATATATGGAAAACGGAACTCTCAAGAGTCATCTCTATGGTTCAGGTCTCCCAAGCTTAAGTTGGAAAGAAAGAATGGAGATCTGTATTGGTTCAGCTAGAGGACTGCATTACCTTCACACTGGCTATGCCAAAGCAGTTATACATCGAGATGTGAAGTCTGCAAATATCCTGCTTGATGAGAACCTTATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACAGGGCCTGAAATTGATCAGACACATGTGAGTACGGCAGTGAAAGGAAGTTTTGGATACCTTGATCCTGAGTATTTCCGTAGGCAACAATTAACAGAAAAATCAGATGTTTATTCATTTGGGGTGGTTTTGTTTGAGGTTCTTTGTGCAAGACCTGTAATAGACCCATCACTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCAATGAAATGGCAGAAAAAGGGGCAATTGGAGCAAATCATCGATCCTACGCTTGCAGGGAAGATCAGACCGGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTGGATCGGCCTTCTATGGGGGATGTCTTGTGGAATTTGGAGTATGCCCTTCAGCTTCAAGAGGCAGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAACATGATTGGCGAACTCTCTCCACAGATAAACAATTTCAATCACGATGCAAGTGTTTCTGTTGCTCAGTTTGAAGCTTCAACCACAGATGACCTTTCTGGTGTTTCAATGAGTACGGTTTTCTCACAGCTGGTGAAGTCTGAGGGGAGGTGA 2499 0.4282 MMDGRKFTFIFGFSILPLLCFSASFVPQDNYLIDCGAASNTSFGGRNFTADAFYKDLLSTKRDVLATTSSKSIASSADSPLYQTARIFNEQSKYKFSINQKGRHWIRLYFYPFQYQNIDMSTANFSVTAQNNVLLSDFAVQKNPVMKEYSVNVTSDNLVITFTPSKNSIAFVNAIEVVSLPDELIADDASSLNPPGSFTGLVTLAFETVWRINMGGPSISPANDTLRRTWVPDQNFLVTPNLATNVTNMAAVTYADGGPTENIAPRSVYGTATEMNSSSDPRSNFNVTWQFDVDPGFQYLVRLHFCDIVSKSLNELYFNVYVNSYMADKDMDLSVSSNNVLGAPFYKDFVTGPTDGKKIRVSVGPSSLNRDYPNAILNGLEIMKMSNSKGSLSVATAVIGTGSSSKNKVAIIVGVVVGTLCAMVLAGFFFVFCRRKRLRRQGLSKTWVPISINDGISHTMGSKYSNGTTLSAASNLGYRIPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKSHLYGSGLPSLSWKERMEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHDASVSVAQFEASTTDDLSGVSMSTVFSQLVKSEGR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00217 832 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Accr13g00217 832 PANTHER OS03G0124300 PROTEIN-RELATED 15 442 IPR046957 GO:0004672
Accr13g00217 832 Gene3D Phosphorylase Kinase; domain 1 455 567 - -
Accr13g00217 832 Pfam Malectin-like domain 33 385 IPR024788 -
Accr13g00217 832 Pfam Protein tyrosine and serine/threonine kinase 497 690 IPR001245 GO:0004672|GO:0006468
Accr13g00217 832 SUPERFAMILY Protein kinase-like (PK-like) 470 763 IPR011009 -
Accr13g00217 832 FunFam Receptor-like protein kinase FERONIA 568 783 - -
Accr13g00217 832 FunFam Putative receptor-like protein kinase 30 181 - -
Accr13g00217 832 CDD STKc_IRAK 498 763 - -
Accr13g00217 832 Gene3D Transferase(Phosphotransferase) domain 1 568 785 - -
Accr13g00217 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Accr13g00217 832 FunFam Receptor-like protein kinase FERONIA 205 387 - -
Accr13g00217 832 ProSiteProfiles Protein kinase domain profile. 492 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00217 832 Gene3D - 29 180 - -
Accr13g00217 832 Gene3D - 204 387 - -
Accr13g00217 832 SMART serkin_6 492 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00217 832 FunFam receptor-like protein kinase FERONIA 457 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00217 Accr-Chr13 2081043 2083541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00217 8 832 Receptor kinase-like Gene Family AT3G46290 66.827 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Accr13g00217 Malectin_like 3.8e-43 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00217 - - gmx:100806488 1332.39