Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00194 ATGACCCCCCAAGAAGAGCGTCTCGTCCTCGACCTTCACTCTAAATGGGGAAATAGGTGGTCAAGAATCGCTCGCAAATTACCAGGACGCACTGATAATGAGATTAAGAATTACTGGAGGACTCACATGAGGAAGATGGCTCAAGAGAAAAAGCGAGCAGCCGCTCCTAATAATTTATCACCTTCATCATCATCAGCATCATTCTCCAAGAACAGCACTACTGGAGAAGAAAGCTTTTATGACACAGGAGGTCCTGGTGATAACATGATATCTTCCACAGAGATACCGATGATAGGTCAAGATCAAGAAGAAGGGTACTCTATGGATGATATATGGAAAGATATTGAAGTGTCAGAAGAAAATAATAACAGTGAAGAGGGCTGCAACTTCTCTTGTCCTTCATGGGAGTACTCTGCTACTTCAGACTCGTTATGGGTTATGGACGAAGAGGAAAGTCAGATTTTTGACCCATTTTTCCCCTGTTACGAACAAGCAGGGGCATCATTACTTCTCTAA 516 0.4302 MTPQEERLVLDLHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKMAQEKKRAAAPNNLSPSSSSASFSKNSTTGEESFYDTGGPGDNMISSTEIPMIGQDQEEGYSMDDIWKDIEVSEENNNSEEGCNFSCPSWEYSATSDSLWVMDEEESQIFDPFFPCYEQAGASLLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00194 171 SUPERFAMILY Homeodomain-like 2 47 IPR009057 -
Accr13g00194 171 CDD SANT 1 43 IPR001005 -
Accr13g00194 171 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Accr13g00194 171 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Accr13g00194 171 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 58 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr13g00194 171 Pfam Myb-like DNA-binding domain 2 42 IPR001005 -
Accr13g00194 171 MobiDBLite consensus disorder prediction 46 93 - -
Accr13g00194 171 Gene3D - 2 72 - -
Accr13g00194 171 MobiDBLite consensus disorder prediction 55 93 - -
Accr13g00194 171 SMART sant 1 45 IPR001005 -
Accr13g00194 171 FunFam MYB transcription factor 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00194 Accr-Chr13 1745644 1746630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00194 1 165 MYB Transcription Factor Family AT3G46130 46.907 6.40e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr13g00194 Myb_DNA-binding 7.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00194 K09422 - qsa:O6P43_028279 194.512