Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00193 ATGGTTGAGCAAGAAATGAGAAAAGGTCCATGGACGGAACAGGAAGACATAAAACTGATGTCGTTTGTTGGCTTTTTTGGAGATCGAAGATGGGATTTTATTGCCAAGATTTCAGGTTTGAAGGTGGCGGGAGATAGATCACAAAAAGTGATAGGAAAAAAAAGGTTACTAGGGCTTGCTGGATCATGGAAAAAAGATAAAGCAGCCTTTAACCACTTCATTTTATTGTAG 231 0.3896 MVEQEMRKGPWTEQEDIKLMSFVGFFGDRRWDFIAKISGLKVAGDRSQKVIGKKRLLGLAGSWKKDKAAFNHFILL 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00193 76 SUPERFAMILY Homeodomain-like 3 37 IPR009057 -
Accr13g00193 76 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 39 IPR017930 -
Accr13g00193 76 Gene3D - 1 67 - -
Accr13g00193 76 CDD SANT 10 41 IPR001005 -
Accr13g00193 76 ProSiteProfiles Myb-like domain profile. 3 49 IPR001005 -
Accr13g00193 76 Pfam Myb-like DNA-binding domain 8 48 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00193 Accr-Chr13 1745339 1745569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00193 1 44 MYB Transcription Factor Family AT5G59780 68.182 1.02e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr13g00193 Myb_DNA-binding 8.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00193 K09422 - qsa:O6P43_028279 84.7297